5Y3J | pdb_00005y3j


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5Y3J designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5Y3J_NAG_B_1009 91% 43% 0.08 0.9660.57 1.61 - 400100%1
5Y3J_NAG_A_1009 79% 43% 0.105 0.950.7 1.47 - 300100%1
5Y3J_NAG_A_1004 75% 46% 0.112 0.9460.77 1.3 - 200100%1
5Y3J_NAG_A_1008 73% 43% 0.095 0.9220.63 1.55 - 400100%1
5Y3J_NAG_B_1008 72% 32% 0.099 0.9220.86 1.81 1 400100%1
5Y3J_NAG_B_1004 69% 47% 0.139 0.9540.83 1.22 1 100100%1
5Y3J_NAG_A_1007 52% 63% 0.118 0.8730.63 0.8 - -00100%1
5Y3J_NAG_B_1006 46% 56% 0.153 0.8870.7 0.97 - 100100%1
5Y3J_NAG_B_1007 43% 37% 0.138 0.8620.6 1.85 - 600100%1
5Y3J_NAG_A_1006 41% 56% 0.16 0.8750.87 0.84 - -00100%1
5Y3J_NAG_B_1003 40% 53% 0.173 0.8820.53 1.26 - 300100%1
5Y3J_NAG_A_1003 34% 45% 0.19 0.8710.49 1.6 - 300100%1
5Y3J_NAG_B_1005 14% 64% 0.293 0.8440.5 0.86 - -00100%1
5Y3J_NAG_A_1010 12% 37% 0.327 0.8590.88 1.58 - 400100%1
5Y3J_NAG_A_1005 9% 66% 0.31 0.8040.57 0.73 - -00100%1
3WPD_NAG_A_907 92% 55% 0.061 0.9520.54 1.2 - 100100%1
5Y3L_NAG_A_1008 88% 50% 0.092 0.9680.43 1.47 - 300100%1
3WPC_NAG_B_902 81% 48% 0.082 0.9320.71 1.3 1 200100%1
3WPB_NAG_A_902 78% 27% 0.085 0.9260.42 2.45 - 310100%1
5Y3K_NAG_B_1008 72% 63% 0.127 0.9510.32 1.06 - 200100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1