5Y3K | pdb_00005y3k


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5Y3K designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5Y3K_NAG_B_1008 72% 63% 0.127 0.9510.32 1.06 - 200100%1
5Y3K_NAG_A_1008 72% 58% 0.132 0.9560.43 1.18 - 100100%1
5Y3K_NAG_B_1009 71% 54% 0.137 0.9590.49 1.26 - 200100%1
5Y3K_NAG_A_1009 71% 61% 0.141 0.9620.31 1.17 - 110100%1
5Y3K_NAG_B_1003 57% 50% 0.14 0.9140.48 1.44 - 100100%1
5Y3K_NAG_A_1003 57% 41% 0.132 0.9050.51 1.73 - 500100%1
5Y3K_NAG_A_1007 50% 48% 0.168 0.920.53 1.44 - 300100%1
5Y3K_NAG_A_1006 47% 56% 0.166 0.9060.48 1.21 - 200100%1
5Y3K_NAG_B_1007 34% 48% 0.169 0.850.54 1.45 - 300100%1
5Y3K_NAG_A_1004 33% 33% 0.257 0.940.53 2.07 - 300100%1
5Y3K_NAG_B_1004 29% 44% 0.271 0.9290.42 1.7 - 300100%1
5Y3K_NAG_A_1005 25% 67% 0.254 0.8890.36 0.89 - -00100%1
5Y3K_NAG_B_1005 15% 43% 0.308 0.8680.66 1.53 - 200100%1
5Y3K_NAG_B_1006 14% 53% 0.32 0.8730.73 1.08 - -00100%1
5Y3K_NAG_B_1010 9% 37% 0.316 0.8120.76 1.69 - 200100%1
3WPD_NAG_A_907 92% 55% 0.061 0.9520.54 1.2 - 100100%1
5Y3J_NAG_B_1009 91% 43% 0.08 0.9660.57 1.61 - 400100%1
5Y3L_NAG_A_1008 88% 50% 0.092 0.9680.43 1.47 - 300100%1
3WPC_NAG_B_902 81% 48% 0.082 0.9320.71 1.3 1 200100%1
3WPB_NAG_A_902 78% 27% 0.085 0.9260.42 2.45 - 310100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1