5YQ5 | pdb_00005yq5


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5YQ5 designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5YQ5_NAG_A_504 69% 42% 0.112 0.9270.62 1.61 - 400100%1
5YQ5_NAG_A_503 67% 48% 0.116 0.9250.61 1.38 - 200100%1
5YQ5_NAG_D_502 60% 32% 0.149 0.9330.71 1.96 - 200100%1
5YQ5_NAG_C_503 58% 28% 0.102 0.880.77 2.07 - 500100%1
5YQ5_NAG_C_502 55% 41% 0.14 0.9080.67 1.6 - 300100%1
5YQ5_NAG_B_501 48% 39% 0.141 0.8850.71 1.66 - 300100%1
5YQ5_NAG_B_502 45% 21% 0.165 0.8951.05 2.2 1 500100%1
5YQ5_NAG_D_503 38% 35% 0.168 0.8680.63 1.91 - 300100%1
5YQ5_NAG_A_502 37% 32% 0.177 0.8730.67 1.99 - 300100%1
5YQ5_NAG_D_501 17% 20% 0.194 0.771 2.37 1 600100%1
5YQ5_NAG_A_501 12% 44% 0.189 0.7190.57 1.55 - 400100%1
5YQ5_NAG_B_503 11% 27% 0.201 0.720.87 2.02 - 400100%1
5YQ5_NAG_C_501 11% 38% 0.265 0.7860.75 1.66 - 400100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1