2DR

2-deoxy-beta-D-erythro-pentofuranose

Created:	2009-07-20
Last modified:	2024-09-27

Find Related PDB Entry
1 entries where 2DR is found as a standalone ligand2 entries where 2DR is covalently linked to polymer or other heterogen groups

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	19
Chiral Atom Count	3
Bond Count	19
Aromatic Bond Count	0

2D diagram of 2DR

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	2-deoxy-beta-D-erythro-pentofuranose
Synonyms	2-deoxy-beta-D-ribofuranose; 2-deoxy-beta-D-erythro-pentose; 2-deoxy-D-erythro-pentose; 2-deoxy-erythro-pentose
Systematic Name (OpenEye OEToolkits)	(2R,4S,5R)-5-(hydroxymethyl)oxolane-2,4-diol
Formula	C₅ H₁₀ O₄
Molecular Weight	134.13
Type	D-SACCHARIDE, BETA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	OCC1OC(O)CC1O
SMILES	CACTVS	3.352	OC[CH]1O[CH](O)C[CH]1O
SMILES	OpenEye OEToolkits	1.6.1	C1C(C(OC1O)CO)O
Canonical SMILES	CACTVS	3.352	OC[C@H]1O[C@@H](O)C[C@@H]1O
Canonical SMILES	OpenEye OEToolkits	1.6.1	C1[C@@H]([C@H](O[C@H]1O)CO)O
InChI	InChI	1.03	InChI=1S/C5H10O4/c6-2-4-3(7)1-5(8)9-4/h3-8H,1-2H2/t3-,4+,5+/m0/s1
InChIKey	InChI	1.03	PDWIQYODPROSQH-VPENINKCSA-N

Related Resource References

Resource Name	Reference
PubChem	439576

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.