B3M

(3R)-3-amino-5-(methylsulfanyl)pentanoic acid

Created:	2008-11-19
Last modified:	2024-09-27

Find Related PDB Entry
4 entries where B3M is found as a standalone ligand2 entries where B3M is found in a polymer sequence

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	23
Chiral Atom Count	1
Bond Count	22
Aromatic Bond Count	0

2D diagram of B3M

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	(3R)-3-amino-5-(methylsulfanyl)pentanoic acid
Systematic Name (OpenEye OEToolkits)	(3R)-3-amino-5-methylsulfanyl-pentanoic acid
Formula	C₆ H₁₃ N O₂ S
Molecular Weight	163.238
Type	L-PEPTIDE LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C(O)CC(N)CCSC
SMILES	CACTVS	3.341	CSCC[CH](N)CC(O)=O
SMILES	OpenEye OEToolkits	1.5.0	CSCCC(CC(=O)O)N
Canonical SMILES	CACTVS	3.341	CSCC[C@H](N)CC(O)=O
Canonical SMILES	OpenEye OEToolkits	1.5.0	CSCC[C@@H](CC(=O)O)N
InChI	InChI	1.03	InChI=1S/C6H13NO2S/c1-10-3-2-5(7)4-6(8)9/h5H,2-4,7H2,1H3,(H,8,9)/t5-/m0/s1
InChIKey	InChI	1.03	QWVNCDVONVDGDV-YFKPBYRVSA-N

Related Resource References

Resource Name	Reference
PubChem	5706673
ChEBI	CHEBI:136681

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.