JM6

N~5~-[4-(methylsulfanyl)butanimidoyl]-L-ornithine

Created:	2009-09-15
Last modified:	2011-06-04

Find Related PDB Entry
2 entries where JM6 is found as a standalone ligand

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	37
Chiral Atom Count	1
Bond Count	36
Aromatic Bond Count	0

2D diagram of JM6

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	N~5~-[4-(methylsulfanyl)butanimidoyl]-L-ornithine
Systematic Name (OpenEye OEToolkits)	(2S)-2-azanyl-5-(4-methylsulfanylbutanimidoylamino)pentanoic acid
Formula	C₁₀ H₂₁ N₃ O₂ S
Molecular Weight	247.358
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	11.02	O=C(O)C(N)CCCNC(=[N@H])CCCSC
SMILES	CACTVS	3.352	CSCCCC(=N)NCCC[CH](N)C(O)=O
SMILES	OpenEye OEToolkits	1.7.0	CSCCCC(=N)NCCCC(C(=O)O)N
Canonical SMILES	CACTVS	3.352	CSCCCC(=N)NCCC[C@H](N)C(O)=O
Canonical SMILES	OpenEye OEToolkits	1.7.0	[H]/N=C(/CCCSC)\NCCC[C@@H](C(=O)O)N
InChI	InChI	1.03	InChI=1S/C10H21N3O2S/c1-16-7-3-5-9(12)13-6-2-4-8(11)10(14)15/h8H,2-7,11H2,1H3,(H2,12,13)(H,14,15)/t8-/m0/s1
InChIKey	InChI	1.03	BHXCYHGJTSQWOB-QMMMGPOBSA-N

Related Resource References

Resource Name	Reference
PubChem	44543653

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.