PRD_001077

Cul1WHB-Dcn1P-stapled acetylated

Created:2012-09-12
Last modified:  2017-05-04

PRD_001077 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 3TDZ.

Chemical Details

Formal Charge0
Atom Count238
Chiral Atom Count13
Bond Count238
Aromatic Bond Count0
Toggle HydrogenToggle Labels

Chemical Component Summary

NameCul1WHB-Dcn1P-stapled acetylated
Systematic Name (OpenEye OEToolkits)[(5S)-5-[[(2S,3S)-2-[[(2S)-2-acetamido-4-methylselanyl-butanoyl]amino]-3-methyl-pentanoyl]amino]-6-[[(2S)-1-[[(3S,6S,9S,12S,16Z,21S)-21-[[(2S)-1-[[(2S)-6-azaniumyl-1-[[(2S)-6-azaniumyl-1-oxidanyl-1-oxidanylidene-hexan-2-yl]amino]-1-oxidanylidene-hexan-2-yl]amino]-5-azanyl-1,5-bis(oxidanylidene)pentan-2-yl]carbamoyl]-3-(4-azaniumylbutyl)-9-(hydroxymethyl)-12,21-dimethyl-6-(2-methylpropyl)-2,5,8,11-tetrakis(oxidanylidene)-1,4,7,10-tetrazacyclohenicos-16-en-12-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-6-oxidanylidene-hexyl]azanium
FormulaC71 H133 N17 O16 Se
Molecular Weight1,559.88
TypePEPTIDE-LIKE

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01O=C(NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC1(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)O)CCCC[NH3+])CCCC[NH3+])CCC(=O)N)(CCCC=CCCC1)C)CCCC[NH3+])CC(C)C)CO)C)CC(C)C)CCCC[NH3+])C(C)CC)CC[Se]C)C
SMILESCACTVS3.385CC[CH](C)[CH](NC(=O)[CH](CC[Se]C)NC(C)=O)C(=O)N[CH](CCCC[NH3+])C(=O)N[CH](CC(C)C)C(=O)N[C]1(C)CCCC=CCCC[C](C)(NC(=O)[CH](CCCC[NH3+])NC(=O)[CH](CC(C)C)NC(=O)[CH](CO)NC1=O)C(=O)N[CH](CCC(N)=O)C(=O)N[CH](CCCC[NH3+])C(=O)NC(CCCC[NH3+])C(O)=O
SMILESOpenEye OEToolkits1.7.6CCC(C)C(C(=O)NC(CCCC[NH3+])C(=O)NC(CC(C)C)C(=O)NC1(CCCC=CCCCC(NC(=O)C(NC(=O)C(NC(=O)C(NC1=O)CO)CC(C)C)CCCC[NH3+])(C)C(=O)NC(CCC(=O)N)C(=O)NC(CCCC[NH3+])C(=O)NC(CCCC[NH3+])C(=O)O)C)NC(=O)C(CC[Se]C)NC(=O)C
Canonical SMILESCACTVS3.385 CC[C@H](C)[C@H](NC(=O)[C@H](CC[Se]C)NC(C)=O)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H](CC(C)C)C(=O)N[C@@]1(C)CCC\C=C/CCC[C@](C)(NC(=O)[C@H](CCCC[NH3+])NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CO)NC1=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCCC[NH3+])C(=O)NC(CCCC[NH3+])C(O)=O
Canonical SMILESOpenEye OEToolkits1.7.6 CC[C@H](C)[C@@H](C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H](CC(C)C)C(=O)N[C@]1(CCC/C=C\CCC[C@@](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC1=O)CO)CC(C)C)CCCC[NH3+])(C)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H](CCCC[NH3+])C(=O)O)C)NC(=O)[C@H](CC[Se]C)NC(=O)C
InChIInChI1.03 InChI=1S/C71H129N17O16Se/c1-11-45(6)57(86-61(95)51(32-39-105-10)77-46(7)90)66(100)80-48(27-17-23-36-73)59(93)83-54(41-44(4)5)65(99)88-71(9)34-21-15-13-12-14-20-33-70(8,87-64(98)49(28-18-24-37-74)79-62(96)53(40-43(2)3)82-63(97)55(42-89)85-69(71)104)68(103)84-50(30-31-56(76)91)60(94)78-47(26-16-22-35-72)58(92)81-52(67(101)102)29-19-25-38-75/h12-13,43-45,47-55,57,89H,11,14-42,72-75H2,1-10H3,(H2,76,91)(H,77,90)(H,78,94)(H,79,96)(H,80,100)(H,81,92)(H,82,97)(H,83,93)(H,84,103)(H,85,104)(H,86,95)(H,87,98)(H,88,99)(H,101,102)/p+4/b13-12-/t45-,47-,48-,49-,50-,51-,52?,53-,54-,55?,57+,70-,71-/m0/s1
InChIKeyInChI1.03 JBSNIMRLEFVMLX-NNBYUKFQSA-R