1PD5 | pdb_00001pd5

Crystal structure of E.coli chloramphenicol acetyltransferase type I at 2.5 Angstrom resolution

PDB DOI: https://doi.org/10.2210/pdb1PD5/pdb

Classification: TRANSFERASE
Organism(s): Escherichia coli
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2003-05-19 Released: 2004-06-01
Deposition Author(s): Roidis, A., Kokkinidis, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free:
0.281 (Depositor), 0.200 (DCC)
R-Value Work:
0.195 (Depositor), 0.210 (DCC)
R-Value Observed:
0.199 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.4 of the entry. See complete history.

Literature

Crystal structure of E.coli chloramphenicol acetyltransferase type I at 2.5 Angstrom resolution

Roidis, A., Kokkinidis, M.

To be published.

Macromolecule Content

Total Structure Weight: 308.31 kDa
Atom Count: 21,418
Modeled Residue Count: 2,558
Deposited Residue Count: 2,628
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Chloramphenicol acetyltransferase	A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	219	Escherichia coli	Mutation(s): 0 Gene Names: CAT OR HCM1.206 EC: 2.3.1.28
UniProt
Find proteins for P62577 (Escherichia coli) Explore P62577 Go to UniProtKB: P62577
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P62577
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.50 Å
R-Value Free: 0.281 (Depositor), 0.200 (DCC)
R-Value Work: 0.195 (Depositor), 0.210 (DCC)
R-Value Observed: 0.199 (Depositor)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 115.739	α = 90
b = 129.702	β = 108.38
c = 117.984	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
MAR345	data collection
SCALEPACK	data scaling
AMoRE	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2004-06-01

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2004-06-01
Type: Initial release
Version 1.1: 2008-04-29
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2017-10-11
Changes: Refinement description
Version 1.4: 2023-08-16
Changes: Data collection, Database references, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.