Download MendeleyStructure of Hemoglobin from flightless bird (Struthio camelus)
Jaimohan, S.M., Naresh, M.D., Mandal, A.B.To be published.
3A59 | pdb_00003a59
Structure of Hemoglobin from flightless bird (Struthio camelus)
- PDB DOI: https://doi.org/10.2210/pdb3A59/pdb
- Classification: OXYGEN STORAGE, OXYGEN TRANSPORT
- Organism(s): Struthio camelus
- Mutation(s): No
- Deposited: 2009-08-03 Released: 2009-08-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.41 Å
- R-Value Free: 0.354 (Depositor), 0.350 (DCC)
- R-Value Work: 0.265 (Depositor), 0.270 (DCC)
- R-Value Observed: 0.275 (Depositor)
Starting Model: experimental
View more details
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemoglobin subunit alpha-A | 141 | Struthio camelus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P01981 (Struthio camelus) Explore P01981 Go to UniProtKB: P01981 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P01981 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemoglobin subunit beta | 146 | Struthio camelus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P02123 (Struthio camelus) Explore P02123 Go to UniProtKB: P02123 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02123 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| HEM Query on HEM | I [auth A] J [auth B] K [auth C] L [auth D] M [auth E] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.41 Å
- R-Value Free: 0.354 (Depositor), 0.350 (DCC)
- R-Value Work: 0.265 (Depositor), 0.270 (DCC)
- R-Value Observed: 0.275 (Depositor)
Space Group: P 41
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 82.051 | α = 90 |
| b = 82.051 | β = 90 |
| c = 214.928 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MAR345 | data collection |
| PHASER | phasing |
| REFMAC | refinement |
| AUTOMAR | data reduction |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2009-08-18 Deposition Author(s): Jaimohan, S.M., Naresh, M.D., Mandal, A.B.
Revision History (Full details and data files)
- Version 1.0: 2009-08-18
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-10-11
Changes: Refinement description - Version 1.3: 2023-11-01
Changes: Data collection, Database references, Derived calculations, Refinement description
