6FTE | pdb_00006fte

Crystal structure of an (R)-selective amine transaminase from Exophiala xenobiotica

• PDB DOI: https://doi.org/10.2210/pdb6FTE/pdb

• Classification: BIOSYNTHETIC PROTEIN
• Organism(s): Exophiala xenobiotica
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2018-02-21 Released: 2019-01-09 
• Deposition Author(s): Telzerow, A., Hakansson, M., Schurrmann, M., Schwab, H., Steiner, K.
• Funding Organization(s): European Union H2020

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.52 Å
• R-Value Free: 
  0.186 (Depositor), 0.190 (DCC) 
• R-Value Work: 
  0.138 (Depositor), 0.150 (DCC) 
• R-Value Observed: 
  0.141 (Depositor) 

Literature

Amine Transaminase from Exophiala xenobiotica - Crystal Structure and Engineering of a Fold IV Transaminase that Naturally Converts Biaryl Ketones

Telzerow, A., Paris, J., Hakansson, M., Gonzalez-Sabin, J., Rios-Lombardia, N., Schurrmann, M., Groger, H., Kourist, R., Schwab, H., Steiner, K.

(2018) ACS Catal 

• DOI: https://doi.org/10.1021/acscatal.8b04524

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 37.86 kDa 
• Atom Count: 2,913 
• Modeled Residue Count: 321 
• Deposited Residue Count: 335 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Amine transaminase (fold IV)	A [auth B]	335	Exophiala xenobiotica	Mutation(s): 0  Gene Names: PV05_00535
UniProt
Find proteins for A0A0D2C5V9 (Exophiala xenobiotica) Explore A0A0D2C5V9  Go to UniProtKB:  A0A0D2C5V9

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
PLP	B	PYRIDOXAL-5'-PHOSPHATE C8 H10 N O6 P NGVDGCNFYWLIFO-UHFFFAOYSA-N
GOL	C [auth B], D [auth B]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
ACT	E [auth B]	ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.52 Å
• R-Value Free:  0.186 (Depositor), 0.190 (DCC) 
• R-Value Work:  0.138 (Depositor), 0.150 (DCC) 
• R-Value Observed: 0.141 (Depositor) 

Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 54.431	α = 90
b = 148.452	β = 90
c = 78.726	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2019-01-09 
Deposition Author(s): Telzerow, A., Hakansson, M., Schurrmann, M., Schwab, H., Steiner, K.

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Funding Organization	Location	Grant Number
European Union H2020	Sweden	634200

Revision History  

• Version 1.0: 2019-01-09
  Type: Initial release
  
• Version 1.1: 2020-01-29
  Changes: Structure summary
• Version 1.2: 2025-04-09
  Changes: Data collection, Database references, Structure summary