9A0R | pdb_00009a0r

Integrative structure of transcriptional enhancer factor TEF-1 bound to C-MYC exon

PDB DOI: https://doi.org/10.2210/pdb9A0R/pdb
NAKB: 9A0R

Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2020-10-08 Released: 2020-12-17
Deposition Author(s): Filandrova R, Valis K, Cerny J, Chmelik J, Slavata L, Fiala J, Rosulek M, Kavan D, Man P, Chum T, Cebecauer M, Fabris D, Novak P

Integrative Structure Snapshot

Multi-Scale: No
Multi-State: No
Ordered-State: No
Deposited Models: 25
Representative Model: 1

wwPDB ValidationFull ReportSummary Report

This is version 1.0 of the entry. See complete history.

Literature

Motif orientation matters: Structural characterization of TEAD1 recognition of genomic DNA

Filandrova R, Valis K, Cerny J, Chmelik J, Slavata L, Fiala J, Rosulek M, Kavan D, Man P, Chum T, Cebecauer M, Fabris D, Novak P

(2021) Structure

DOI: https://doi.org/10.1016/j.str.2020.11.018

Macromolecule Content

Total Structure Weight: 21.32 kDa
Atom Count: 1,345
Modeled Residue Count: 117
Deposited Residue Count: 117
Unique protein chains: 1
Unique nucleic acid chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Transcriptional enhancer factor TEF-3	A	87	Homo sapiens	Mutation(s): 0 Gene Names: TEAD1
UniProt & NIH Common Fund Data Resources
Find proteins for P28347 (Homo sapiens) Explore P28347 Go to UniProtKB: P28347
PHAROS: P28347 GTEx: ENSG00000187079
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P28347
Sequence Annotations Expand
Reference Sequence

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(by identity cutoff)

Entity ID: 2
Molecule	Chains	Length	Organism	Image
DNA (30-MER)	B	30	N/A
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Integrative Structure Snapshot

Multi-Scale: No
Multi-State: No
Ordered-State: No
Deposited Models: 25
Representative Model: 1

Structure Validation

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View Summary Validation Report

Entry History

Deposition Data

Released Date: 2020-12-17

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2020-12-17
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.