9EN1 | pdb_00009en1

FliG interacting domain of SpFlhF (FID)

PDB DOI: https://doi.org/10.2210/pdb9EN1/pdb

Classification: SIGNALING PROTEIN
Organism(s): Shewanella putrefaciens CN-32
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2024-03-12 Released: 2025-03-26
Deposition Author(s): Dornes, A., Mais, C.-N., Bange, G.
Funding Organization(s): German Research Foundation (DFG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.01 Å
R-Value Free:
0.268 (Depositor), 0.268 (DCC)
R-Value Work:
0.235 (Depositor), 0.238 (DCC)
R-Value Observed:
0.236 (Depositor)

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

FlhF-directed assembly of a polar flagellum

Dornes, A., Schmidt, L.M., Mais, C.-N., Hook, J.C., Kressler, D., Thormann, K., Bange, G.

To be published.

Macromolecule Content

Total Structure Weight: 70.47 kDa
Atom Count: 4,269
Modeled Residue Count: 562
Deposited Residue Count: 636
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Flagellar biosynthesis protein FlhF	A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	53	Shewanella putrefaciens CN-32	Mutation(s): 0 Gene Names: Sputcn32_2561
UniProt
Find proteins for A4Y8J9 (Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)) Explore A4Y8J9 Go to UniProtKB: A4Y8J9
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A4Y8J9
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.01 Å
R-Value Free: 0.268 (Depositor), 0.268 (DCC)
R-Value Work: 0.235 (Depositor), 0.238 (DCC)
R-Value Observed: 0.236 (Depositor)

Space Group: P 4₃

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 106.53	α = 90
b = 106.53	β = 90
c = 106.62	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XSCALE	data scaling
XDS	data reduction
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2025-03-26

Deposition Author(s):

Funding Organization	Location	Grant Number
German Research Foundation (DFG)	Germany	495924434

Revision History (Full details and data files)

Version 1.0: 2025-03-26
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.