1IY8 | pdb_00001iy8

Crystal Structure of Levodione Reductase

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d1iy8h_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Levodione reductase	(Leifsonia aquatica ) [TaxId: 144185 ],	SCOPe (2.08)
G	d1iy8g_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Levodione reductase	(Leifsonia aquatica ) [TaxId: 144185 ],	SCOPe (2.08)
F	d1iy8f_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Levodione reductase	(Leifsonia aquatica ) [TaxId: 144185 ],	SCOPe (2.08)
E	d1iy8e_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Levodione reductase	(Leifsonia aquatica ) [TaxId: 144185 ],	SCOPe (2.08)
D	d1iy8d_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Levodione reductase	(Leifsonia aquatica ) [TaxId: 144185 ],	SCOPe (2.08)
C	d1iy8c_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Levodione reductase	(Leifsonia aquatica ) [TaxId: 144185 ],	SCOPe (2.08)
B	d1iy8b_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Levodione reductase	(Leifsonia aquatica ) [TaxId: 144185 ],	SCOPe (2.08)
A	d1iy8a_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Levodione reductase	(Leifsonia aquatica ) [TaxId: 144185 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	SDR-like	8057165	3000038	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	SDR-like	8057165	3000038	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	SDR-like	8057165	3000038	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	SDR-like	8057165	3000038	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	SDR-like	8057165	3000038	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	SDR-like	8057165	3000038	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	SDR-like	8057165	3000038	SCOP2B (2022-06-29)
A	SCOP2 Family	Short-chain dehydrogenases/reductases, SDR	8057164	4000029	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SDR-like	8057165	3000038	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	KR	e1iy8H1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
G	KR	e1iy8G1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
F	KR	e1iy8F1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
E	KR	e1iy8E1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
D	KR	e1iy8D1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
C	KR	e1iy8C1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
B	KR	e1iy8B1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
A	adh_short_C2	e1iy8A1	A: alpha bundles	X: Rossmann-like	H: Rossmann-related	T: NAD(P)-binding Rossmann-fold domains	F: adh_short_C2	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
G	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
F	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
E	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
D	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
C	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
B	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
A	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	LEVODIONE REDUCTASE	oxidoreductase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR057326	Ketoreductase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR002347	Short-chain dehydrogenase/reductase SDR	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.