1Y2X | pdb_00001y2x

Crystal structure of the tetragonal form of the common edible mushroom (Agaricus bisporus) lectin in complex with T-antigen and N-acetylglucosamine

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1y2xd_	All beta proteins	Cytolysin/lectin	Cytolysin/lectin	Fungal fruit body lectin	TF antigen-binding lectin	(Agaricus bisporus ) [TaxId: 5341 ],	SCOPe (2.08)
C	d1y2xc_	All beta proteins	Cytolysin/lectin	Cytolysin/lectin	Fungal fruit body lectin	TF antigen-binding lectin	(Agaricus bisporus ) [TaxId: 5341 ],	SCOPe (2.08)
B	d1y2xb_	All beta proteins	Cytolysin/lectin	Cytolysin/lectin	Fungal fruit body lectin	TF antigen-binding lectin	(Agaricus bisporus ) [TaxId: 5341 ],	SCOPe (2.08)
A	d1y2xa_	All beta proteins	Cytolysin/lectin	Cytolysin/lectin	Fungal fruit body lectin	TF antigen-binding lectin	(Agaricus bisporus ) [TaxId: 5341 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Cytolysin/lectin	8044274	3000379	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Cytolysin/lectin	8044274	3000379	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Cytolysin/lectin	8044274	3000379	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Cytolysin/lectin	8044274	3000379	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	FB_lectin	e1y2xD1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Osmotin-like (From Topology)	T: Osmotin-like	F: FB_lectin	ECOD (1.6)
C	FB_lectin	e1y2xC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Osmotin-like (From Topology)	T: Osmotin-like	F: FB_lectin	ECOD (1.6)
B	FB_lectin	e1y2xB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Osmotin-like (From Topology)	T: Osmotin-like	F: FB_lectin	ECOD (1.6)
A	FB_lectin	e1y2xA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Osmotin-like (From Topology)	T: Osmotin-like	F: FB_lectin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.60.270.20	Mainly Beta	Sandwich	Mutm (Fpg) Protein	Chain: A, domain 2	CATH (4.3.0)
C	2.60.270.20	Mainly Beta	Sandwich	Mutm (Fpg) Protein	Chain: A, domain 2	CATH (4.3.0)
B	2.60.270.20	Mainly Beta	Sandwich	Mutm (Fpg) Protein	Chain: A, domain 2	CATH (4.3.0)
A	2.60.270.20	Mainly Beta	Sandwich	Mutm (Fpg) Protein	Chain: A, domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF07367	Fungal fruit body lectin (FB_lectin)	Fungal fruit body lectin	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	lectin	binding carbohydrate binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR015926	Cytolysin/lectin	Homologous Superfamily
A, B, C, D	IPR009960	Fungal fruit body lectin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.