2NWU | pdb_00002nwu

Crystal structure of protein SSO1042 from Sulfolobus solfataricus, Pfam DUF54

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2nwua1 Alpha and beta proteins (a+b) RL5-like RL5-like SSO1042-like Hypothetical protein SSo1042 (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)
Bd2nwub_ Alpha and beta proteins (a+b) RL5-like RL5-like SSO1042-like automated matches (Saccharolobus solfataricus P2 ) [TaxId: 273057 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRL5-like 8034922 3001709 SCOP2B (2022-06-29)
BSCOP2 FamilySSO1042-like 8022542 4002138 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyRL5-like 8034922 3001709 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARNA_bindinge2nwuA1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: RNA_bindingECOD (1.6)
BRNA_bindinge2nwuB1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: RNA_bindingECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1440.10 Alpha Beta 2-Layer Sandwich 50s Ribosomal Protein L5 Chain: A,CATH (4.3.0)
B3.30.1440.10 Alpha Beta 2-Layer Sandwich 50s Ribosomal Protein L5 Chain: A,CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01877RNA binding (RNA_binding)RNA binding- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
A, B
IPR002739RNA-binding protein PAB1135-likeFamily