3BJD | pdb_00003bjd

Crystal structure of putative 3-oxoacyl-(acyl-carrier-protein) synthase from Pseudomonas aeruginosa

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Haem_oxygenas_2	e3bjdA2	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Heme oxygenase/Ribonucleotide reductase	F: Haem_oxygenas_2	ECOD (1.6)
A	HOASN	e3bjdA1	A: alpha superhelices	X: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain (From Topology)	H: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain (From Topology)	T: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain	F: HOASN	ECOD (1.6)
B	Haem_oxygenas_2	e3bjdB2	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Heme oxygenase/Ribonucleotide reductase	F: Haem_oxygenas_2	ECOD (1.6)
B	HOASN	e3bjdB1	A: alpha superhelices	X: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain (From Topology)	H: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain (From Topology)	T: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain	F: HOASN	ECOD (1.6)
C	Haem_oxygenas_2	e3bjdC2	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Heme oxygenase/Ribonucleotide reductase	F: Haem_oxygenas_2	ECOD (1.6)
C	HOASN	e3bjdC1	A: alpha superhelices	X: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain (From Topology)	H: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain (From Topology)	T: Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain	F: HOASN	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.1240.20	Mainly Alpha	Orthogonal Bundle	Methyltransferase, Methionine Synthase (B12-binding Domains)	Chain A, domain 1	CATH (4.3.0)
A	1.20.910.10	Mainly Alpha	Up-down Bundle	Heme Oxygenase	Chain A	CATH (4.3.0)
B	1.10.1240.20	Mainly Alpha	Orthogonal Bundle	Methyltransferase, Methionine Synthase (B12-binding Domains)	Chain A, domain 1	CATH (4.3.0)
B	1.20.910.10	Mainly Alpha	Up-down Bundle	Heme Oxygenase	Chain A	CATH (4.3.0)
C	1.10.1240.20	Mainly Alpha	Orthogonal Bundle	Methyltransferase, Methionine Synthase (B12-binding Domains)	Chain A, domain 1	CATH (4.3.0)
C	1.20.910.10	Mainly Alpha	Up-down Bundle	Heme Oxygenase	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF14518	Iron-containing redox enzyme (Haem_oxygenas_2)	Iron-containing redox enzyme	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Putative 3-oxoacyl-(acyl-carrier-protein) synthase	oxidoreductase activity catalytic activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity cation binding ion binding binding metal ion binding small molecule binding	-	cellular anatomical structure periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR039068	Pyrroloquinoline-quinone synthase-like	Family
A, B, C	IPR037061	Lytic transglycosylase, superhelical linker domain superfamily	Homologous Superfamily
A, B, C	IPR016084	Haem oxygenase-like, multi-helical	Homologous Superfamily
A, B, C	IPR029474	Haem-oxygenase-associated, N-terminal helices	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.