3ULA | pdb_00003ula

Crystal structure of the TV3 mutant F63W-MD-2-Eritoran complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CSidM_Rab1-acte3ulaC4 A: alpha bundlesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: SidM_Rab1-actECOD (develop294)
ASidM_Rab1-acte3ulaA4 A: alpha bundlesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: SidM_Rab1-actECOD (develop294)
DIg_2e3ulaD2 A: alpha bundlesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: Ig_2ECOD (develop294)
BNTP_transf_2e3ulaB1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: NTP_transf_2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF13855Leucine rich repeat (LRR_8)Leucine rich repeat- Repeat
A, C
PF12799Leucine Rich repeats (2 copies) (LRR_4)Leucine Rich repeats (2 copies)- Repeat
B, D
PF02221ML domain (E1_DerP2_DerF2)ML domainML domain - MD-2-related lipid recognition domain. This family consists of proteins from plants, animals and fungi, including dust mite allergen Der P 2 (Swiss:P49278). It has been implicate in lipid recognition, particularly in the recognition of pa ...ML domain - MD-2-related lipid recognition domain. This family consists of proteins from plants, animals and fungi, including dust mite allergen Der P 2 (Swiss:P49278). It has been implicate in lipid recognition, particularly in the recognition of pathogen related products. A mutation in Npc2 (Swiss:Q15668) causes a rare form of Niemann-Pick type C2 disease. This domain has a similar topology to immunoglobulin domains.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Toll-like receptor 4, Variable lymphocyte receptor B
B, D
Lymphocyte antigen 96

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, C
PharosO00206
B, D
PharosQ9Y6Y9