4AUW | pdb_00004auw

CRYSTAL STRUCTURE OF THE BZIP HOMODIMERIC MAFB IN COMPLEX WITH THE C- MARE BINDING SITE

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	bZIP_Maf	e4auwF1	A: alpha bundles	X: A DNA-binding domain in eukaryotic transcription factors (From Topology)	H: A DNA-binding domain in eukaryotic transcription factors (From Topology)	T: A DNA-binding domain in eukaryotic transcription factors	F: bZIP_Maf	ECOD (1.6)
E	bZIP_Maf	e4auwE1	A: alpha bundles	X: A DNA-binding domain in eukaryotic transcription factors (From Topology)	H: A DNA-binding domain in eukaryotic transcription factors (From Topology)	T: A DNA-binding domain in eukaryotic transcription factors	F: bZIP_Maf	ECOD (1.6)
B	bZIP_Maf	e4auwB2	A: alpha bundles	X: A DNA-binding domain in eukaryotic transcription factors (From Topology)	H: A DNA-binding domain in eukaryotic transcription factors (From Topology)	T: A DNA-binding domain in eukaryotic transcription factors	F: bZIP_Maf	ECOD (1.6)
A	bZIP_Maf	e4auwA2	A: alpha bundles	X: A DNA-binding domain in eukaryotic transcription factors (From Topology)	H: A DNA-binding domain in eukaryotic transcription factors (From Topology)	T: A DNA-binding domain in eukaryotic transcription factors	F: bZIP_Maf	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	1.20.5.170	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
E	1.20.5.170	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
B	1.20.5.170	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
A	1.20.5.170	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, E, F	PF03131	bZIP Maf transcription factor (bZIP_Maf)	bZIP Maf transcription factor	-	Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D, G	C-MARE BINDING SITE (5'-D(APTPAPAPTPGPCPTP* GPAPCPGPTPCPAPGPCPAPAPTPT)-3')	-	-	-
C, H	C-MARE BINDING SITE (5'-D(APTPAPAPTPGPCPTP* GPAPCPGPTPCPAPGPCPAPAPTPT)-3')	-	-	-
A, B, E, F	TRANSCRIPTION FACTOR MAFB	DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding protein-containing complex binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding protein-containing complex binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity identical protein binding protein binding	developmental process multicellular organism development multicellular organismal process segmentation anatomical structure development pattern specification process regionalization segment specification epithelium development epidermal cell differentiation cellular developmental process epidermis development animal organ development tissue development developmental process multicellular organism development multicellular organismal process segmentation anatomical structure development pattern specification process regionalization segment specification epithelium development epidermal cell differentiation cellular developmental process epidermis development animal organ development tissue development epithelial cell differentiation skin development cell differentiation keratinocyte differentiation cellular process immune system development gland development hematopoietic or lymphoid organ development thymus development immune system process system development ear morphogenesis embryonic organ morphogenesis ear development sensory organ development embryonic morphogenesis embryo development anatomical structure morphogenesis sensory organ morphogenesis inner ear development inner ear morphogenesis animal organ morphogenesis embryonic organ development head development brain development rhombomere 5 development nervous system development central nervous system development hindbrain development rhombomere development regulation of cellular process regulation of developmental process homeostatic process negative regulation of biological process cell development regulation of cell differentiation regulation of cell development negative regulation of erythrocyte differentiation negative regulation of cellular process negative regulation of cell differentiation regulation of immune system process regulation of multicellular organismal process myeloid cell homeostasis erythrocyte homeostasis regulation of biological process regulation of multicellular organismal development negative regulation of developmental process hemopoiesis regulation of myeloid cell differentiation biological regulation negative regulation of myeloid cell differentiation erythrocyte differentiation regulation of erythrocyte differentiation multicellular organismal-level homeostasis myeloid cell differentiation regulation of hemopoiesis homeostasis of number of cells respiratory gaseous exchange by respiratory system primary metabolic process gene expression macromolecule biosynthetic process protein maturation biosynthetic process proteolysis protein processing metabolic process protein metabolic process macromolecule metabolic process myeloid leukocyte differentiation regulation of leukocyte differentiation regulation of osteoclast differentiation osteoclast differentiation negative regulation of hemopoiesis negative regulation of leukocyte differentiation regulation of myeloid leukocyte differentiation negative regulation of osteoclast differentiation negative regulation of myeloid leukocyte differentiation negative regulation of cell development negative regulation of immune system process negative regulation of multicellular organismal process leukocyte differentiation rhombomere 6 development embryo development ending in birth or egg hatching chordate embryonic development in utero embryonic development cell activation mononuclear cell differentiation lymphocyte activation lymphocyte differentiation leukocyte activation T cell differentiation in thymus T cell activation T cell differentiation abducens nerve morphogenesis cranial nerve formation cranial nerve morphogenesis abducens nerve development nerve development cranial nerve development anatomical structure formation involved in morphogenesis abducens nerve formation positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process membrane organization cornified envelope assembly membrane biogenesis membrane assembly cellular component organization cellular component biogenesis cellular component assembly plasma membrane organization cellular component organization or biogenesis endomembrane system organization transcription by RNA polymerase II regulation of transcription by RNA polymerase II response to nutrient levels response to stimulus response to chemical response to nutrient central nervous system segmentation brain segmentation positive regulation of transcription by RNA polymerase II	RNA polymerase II transcription regulator complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex transcription regulator complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm RNA polymerase II transcription regulator complex membrane-bounded organelle protein-containing complex intracellular anatomical structure nucleus nuclear protein-containing complex transcription regulator complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, E, F	IPR004827	Basic-leucine zipper domain	Domain
A, B, E, F	IPR008917	Transcription factor, Skn-1-like, DNA-binding domain superfamily	Homologous Superfamily
A, B, E, F	IPR013592	Maf transcription factor, N-terminal	Domain
A, B, E, F	IPR004826	Basic leucine zipper domain, Maf-type	Domain
A, B, E, F	IPR024874	Transcription factor Maf family	Family
A, B, E, F	IPR046347	Basic-leucine zipper domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.