4W80 | pdb_00004w80

Tetrameric BAP29 vDED with disulfide bonds in crystal contacts

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Bap31/Bap29 transmembrane region-like	8106671	3002862	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Bap31/Bap29 transmembrane region-like	8106671	3002862	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bap31/Bap29 transmembrane region-like	8106671	3002862	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Bap31/Bap29 transmembrane region-like	8106671	3002862	SCOP2B (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.20.5.110	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
C	1.20.5.110	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
B	1.20.5.110	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
A	1.20.5.110	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF18035	Bap31/Bap29 cytoplasmic coiled-coil domain (Bap31_Bap29_C)	Bap31/Bap29 cytoplasmic coiled-coil domain	-	Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	B-cell receptor-associated protein 29	-	cellular process apoptotic process cell death programmed cell death cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process apoptotic process cell death programmed cell death cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization intracellular protein localization intracellular protein transport developmental process multicellular organismal process cellular developmental process ossification cell differentiation osteoblast differentiation protein localization to organelle protein localization to endoplasmic reticulum exit site protein localization to endoplasmic reticulum endoplasmic reticulum to Golgi vesicle-mediated transport Golgi vesicle transport vesicle-mediated transport	cellular anatomical structure membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane cellular anatomical structure membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR040463	BAP29/BAP31, transmembrane domain	Domain
A, B, C, D	IPR041672	Bap31/Bap29 cytoplasmic coiled-coil domain	Domain
A, B, C, D	IPR008417	B-cell receptor-associated protein 29/31	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	Pharos: Q9UHQ4	atypical teratoid rhabdoid tumor heart disease malignant glioma ovarian cancer pilocytic astrocytoma psoriasis gastric carcinoma large cell medulloblastoma medulloblastoma pancreatic ductal adenocarcinoma primitive neuroectodermal tumor glioblastoma malignant ependymoma osteosarcoma Pick disease atypical teratoid rhabdoid tumor heart disease malignant glioma ovarian cancer pilocytic astrocytoma psoriasis gastric carcinoma large cell medulloblastoma medulloblastoma pancreatic ductal adenocarcinoma primitive neuroectodermal tumor glioblastoma malignant ependymoma osteosarcoma Pick disease progressive supranuclear palsy

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.