5I4E | pdb_00005i4e

Crystal Structure of Human Nonmuscle Myosin 2C motor domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Myosin_N	e5i4eA2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Myosin_N	ECOD (1.6)
A	Spectrin	e5i4eA1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat (From Topology)	T: Spectrin repeat	F: Spectrin	ECOD (1.6)
A	Myosin_head	e5i4eA4	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Myosin_head	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.30.360	Mainly Beta	Roll	SH3 type barrels.	Myosin S1 fragment, N-terminal	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00435	Spectrin repeat (Spectrin)	Spectrin repeat	Spectrin repeat-domains are found in several proteins involved in cytoskeletal structure. These include spectrin, alpha-actinin and dystrophin. The sequence repeat used in this family is taken from the structural repeat in reference [2]. The spectr ...	Spectrin repeat-domains are found in several proteins involved in cytoskeletal structure. These include spectrin, alpha-actinin and dystrophin. The sequence repeat used in this family is taken from the structural repeat in reference [2]. The spectrin domain- repeat forms a three helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C. Although the domain occurs in multiple repeats along sequences, the domains are actually stable on their own - ie they act, biophysically, like domains rather than repeats that along function when aggregated.	Domain
A	PF02736	Myosin N-terminal SH3-like domain (Myosin_N)	Myosin N-terminal SH3-like domain	This domain has an SH3-like fold. It is found at the N-terminus of many but not all myosins. The function of this domain is unknown.	Domain
A	PF00063	Myosin head (motor domain) (Myosin_head)	Myosin head (motor domain)		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Myosin-14,Alpha-actinin A	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding cytoskeletal protein binding actin binding protein-containing complex binding protein binding actin filament binding protein-macromolecule adaptor activity molecular adaptor activity structural constituent of cytoskeleton cation binding ion binding binding calcium ion binding metal ion binding small molecule binding cytoskeletal protein binding actin binding protein-containing complex binding protein binding actin filament binding protein-macromolecule adaptor activity molecular adaptor activity structural constituent of cytoskeleton structural molecule activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding calmodulin binding polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity microfilament motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity	localization import into cell transport phagocytosis cellular process endocytosis establishment of localization vesicle-mediated transport cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization localization import into cell transport phagocytosis cellular process endocytosis establishment of localization vesicle-mediated transport cellular component organization organelle organization actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization response to osmotic stress hyperosmotic response response to stimulus response to stress response to abiotic stimulus cellular response to stimulus cellular response to nutrient levels response to nutrient levels cellular response to stress response to starvation cellular response to starvation actin filament organization actin crosslink formation supramolecular fiber organization developmental process sorocarp development biological process involved in intraspecies interaction between organisms anatomical structure development socially cooperative development cell motility cellular component biogenesis cellular component assembly actin filament bundle organization actin filament bundle assembly mitotic cell cycle process cytoskeleton-dependent cytokinesis mitotic cytokinesis cytokinesis cell division cell cycle mitotic cell cycle cell cycle process multicellular organismal movement musculoskeletal movement multicellular organismal process system process nervous system process neuromuscular process skeletal muscle contraction muscle contraction muscle system process striated muscle contraction muscle structure development skeletal muscle organ development skeletal muscle tissue development animal organ development muscle tissue development muscle organ development tissue development striated muscle tissue development actomyosin structure organization regulation of biological process regulation of developmental process biological regulation regulation of cell shape cell morphogenesis regulation of cell morphogenesis anatomical structure morphogenesis regulation of biological quality regulation of anatomical structure morphogenesis action potential transmission of nerve impulse cell communication neuronal action potential regulation of membrane potential sensory perception sensory perception of sound sensory perception of mechanical stimulus behavior vocalization behavior mitochondrion organization actin filament-based movement	cell projection cellular anatomical structure macropinocytic cup plasma membrane bounded cell projection pseudopodium cell periphery cell cortex intracellular anatomical structure cytoplasm cytosol cell leading edge membrane-bounded organelle intracellular vesicle phagocytic vesicle cell projection cellular anatomical structure macropinocytic cup plasma membrane bounded cell projection pseudopodium cell periphery cell cortex intracellular anatomical structure cytoplasm cytosol cell leading edge membrane-bounded organelle intracellular vesicle phagocytic vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle vesicle endocytic vesicle extracellular matrix external encapsulating structure intracellular membraneless organelle vacuole contractile vacuole complex contractile vacuole membraneless organelle cortical cytoskeleton actin cytoskeleton cytoskeleton cortical actin cytoskeleton polymeric cytoskeletal fiber actin filament supramolecular fiber supramolecular polymer supramolecular complex membrane actomyosin extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle apical part of cell cluster of actin-based cell projections brush border myosin filament growth cone axon distal axon neuron projection site of polarized growth myosin II filament protein-containing complex myosin complex myosin II complex actin filament bundle stress fiber contractile actin filament bundle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001715	Calponin homology domain	Domain
A	IPR014837	EF-hand, Ca insensitive	Domain
A	IPR002048	EF-hand domain	Domain
A	IPR011992	EF-hand domain pair	Homologous Superfamily
A	IPR018247	EF-Hand 1, calcium-binding site	Binding Site
A	IPR001589	Actinin-type actin-binding domain, conserved site	Conserved Site
A	IPR036872	CH domain superfamily	Homologous Superfamily
A	IPR018159	Spectrin/alpha-actinin	Repeat
A	IPR002017	Spectrin repeat	Repeat
A	IPR036961	Kinesin motor domain superfamily	Homologous Superfamily
A	IPR001609	Myosin head, motor domain-like	Domain
A	IPR000048	IQ motif, EF-hand binding site	Binding Site
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR004009	Myosin, SH3 domain	Domain
A	IPR002928	Myosin tail	Domain
A	IPR008989	Myosin S1 fragment, N-terminal	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q7Z406	peripheral neuropathy-myopathy-hoarseness-hearing loss syndrome autosomal dominant nonsyndromic deafness 4A nonsyndromic genetic deafness prostate cancer peripheral neuropathy arthrogryposis Congenital myopathy (disorder) interstitial cystitis malignant mesothelioma multiple sclerosis ovarian cancer cutaneous lupus erythematosus low anorectal malformation medulloblastoma peripheral nervous system disease peripheral neuropathy-myopathy-hoarseness-hearing loss syndrome autosomal dominant nonsyndromic deafness 4A nonsyndromic genetic deafness prostate cancer peripheral neuropathy arthrogryposis Congenital myopathy (disorder) interstitial cystitis malignant mesothelioma multiple sclerosis ovarian cancer cutaneous lupus erythematosus low anorectal malformation medulloblastoma peripheral nervous system disease pilocytic astrocytoma psoriasis Charcot-Marie-Tooth disease glioblastoma malignant glioma osteosarcoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.