Crystal structure of Seleno-OphA-DeltaC18 in complex with SAM
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | MazG | e5n0oA3 | A: alpha bundles | X: all-alpha NTP pyrophosphatases (From Homology) | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: MazG | ECOD (1.6) |
| A | UNK_F_TYPE | e5n0oA2 | A: a+b two layers | X: Tetrapyrrole methylase C-terminal domain-like | H: Tetrapyrrole methylase C-terminal domain (From Topology) | T: Tetrapyrrole methylase C-terminal domain | F: UNK_F_TYPE | ECOD (1.6) |
| A | TP_methylase_N | e5n0oA1 | A: a/b three-layered sandwiches | X: Tetrapyrrole methylase N-terminal domain (From Topology) | H: Tetrapyrrole methylase N-terminal domain (From Topology) | T: Tetrapyrrole methylase N-terminal domain | F: TP_methylase_N | ECOD (1.6) |
| B | UNK_F_TYPE | e5n0oB1 | A: alpha bundles | X: all-alpha NTP pyrophosphatases (From Homology) | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: UNK_F_TYPE | ECOD (1.6) |
| B | UNK_F_TYPE | e5n0oB2 | A: a+b two layers | X: Tetrapyrrole methylase C-terminal domain-like | H: Tetrapyrrole methylase C-terminal domain (From Topology) | T: Tetrapyrrole methylase C-terminal domain | F: UNK_F_TYPE | ECOD (1.6) |
| B | TP_methylase_N | e5n0oB3 | A: a/b three-layered sandwiches | X: Tetrapyrrole methylase N-terminal domain (From Topology) | H: Tetrapyrrole methylase N-terminal domain (From Topology) | T: Tetrapyrrole methylase N-terminal domain | F: TP_methylase_N | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00590 | Tetrapyrrole (Corrin/Porphyrin) Methylases (TP_methylase) | Tetrapyrrole (Corrin/Porphyrin) Methylases | This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function, including Swiss:P45528. This family includes the methylase Dipthine synthase. | Domain | |
| PF00590 | Tetrapyrrole (Corrin/Porphyrin) Methylases (TP_methylase) | Tetrapyrrole (Corrin/Porphyrin) Methylases | This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function, including Swiss:P45528. This family includes the methylase Dipthine synthase. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Peptide N-methyltransferase | - | |||
| Peptide N-methyltransferase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR035996 | Tetrapyrrole methylase superfamily | Homologous Superfamily | |
| IPR014777 | Tetrapyrrole methylase, subdomain 1 | Homologous Superfamily | |
| IPR000878 | Tetrapyrrole methylase | Domain | |
| IPR035996 | Tetrapyrrole methylase superfamily | Homologous Superfamily | |
| IPR014777 | Tetrapyrrole methylase, subdomain 1 | Homologous Superfamily | |
| IPR000878 | Tetrapyrrole methylase | Domain |
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| CSX | Parent Component: CYS :  AA0451 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 | |
| MSE | Parent Component: MET :  AA0451 | |
| CSO | Parent Component: CYS :  AA0451 , AA0205 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , L-cysteine sulfenic acid MOD:00210 | |
| CSX | Parent Component: CYS :  AA0451 , AA0205 , AA0451 :  2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 , L-cysteine sulfenic acid MOD:00210 , 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380 | |
| MSE | Parent Component: MET :  AA0451 , AA0205 , AA0451 | |














