2.9S structure of the 70S ribosome composing the S. aureus 100S complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| G [auth Ag] | SCOP2B Superfamily | Ribosomal protein S7 | 8094561 | 3000799 | SCOP2B (2022-06-29) |
| J [auth Aj] | SCOP2B Superfamily | Ribosomal protein S10 | 8094879 | 3001336 | SCOP2B (2022-06-29) |
| K [auth Ak] | SCOP2B Superfamily | Translational machinery components | 8096098 | 3000571 | SCOP2B (2022-06-29) |
| L [auth Al] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8100938 | 3000135 | SCOP2B (2022-06-29) |
| S [auth As] | SCOP2 Family | Ribosomal protein S19 | 8096099 | 4001081 | SCOP2 (2022-06-29) |
| S [auth As] | SCOP2 Superfamily | Ribosomal protein S19 | 8096100 | 3000686 | SCOP2 (2022-06-29) |
| HA [auth AL] | SCOP2B Superfamily | Prokaryotic ribosomal protein L17 | 8089024 | 3000995 | SCOP2B (2022-06-29) |
| KA [auth AO] | SCOP2 Family | Ribosomal protein L20 | 8075001 | 4001930 | SCOP2 (2022-06-29) |
| KA [auth AO] | SCOP2 Superfamily | Ribosomal protein L20 | 8075002 | 3000563 | SCOP2 (2022-06-29) |
| OA [auth AS] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8095283 | 3000334 | SCOP2B (2022-06-29) |
| RA [auth AV] | SCOP2 Family | Ribosomal protein L28 | 8089399 | 4003961 | SCOP2 (2022-06-29) |
| RA [auth AV] | SCOP2 Superfamily | L28p-like | 8089400 | 3001966 | SCOP2 (2022-06-29) |
| TA [auth AX] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8095165 | 3001378 | SCOP2B (2022-06-29) |
| WA [auth A1] | SCOP2 Family | Ribosomal protein L33p | 8075055 | 4000511 | SCOP2 (2022-06-29) |
| WA [auth A1] | SCOP2 Superfamily | Zn-binding ribosomal proteins | 8075056 | 3001320 | SCOP2 (2022-06-29) |
| I [auth Ai] | SCOP2 Family | Translational machinery components | 8096263 | 4000951 | SCOP2 (2022-06-29) |
| I [auth Ai] | SCOP2 Superfamily | Ribosomal protein S5 domain 2-like | 8096264 | 3000100 | SCOP2 (2022-06-29) |
| H [auth Ah] | SCOP2B Superfamily | Ribosomal protein S8 | 8079053 | 3000709 | SCOP2B (2022-06-29) |
| F [auth Af] | SCOP2B Superfamily | Ribosomal protein S6 | 8066491 | 3001323 | SCOP2B (2022-06-29) |
| ZA [auth A4] | SCOP2 Family | Ribosomal protein L36 | 8083305 | 4003715 | SCOP2 (2022-06-29) |
| ZA [auth A4] | SCOP2 Superfamily | Ribosomal protein L36 | 8083306 | 3001346 | SCOP2 (2022-06-29) |
| YA [auth A3] | SCOP2 Family | Ribosomal protein L35p | 8083331 | 4003406 | SCOP2 (2022-06-29) |
| YA [auth A3] | SCOP2 Superfamily | L35p-like | 8083332 | 3000790 | SCOP2 (2022-06-29) |
| UA [auth AY] | SCOP2 Family | Ribosomal protein L31p | 8100931 | 4003966 | SCOP2 (2022-06-29) |
| UA [auth AY] | SCOP2 Superfamily | L28p-like | 8100932 | 3001966 | SCOP2 (2022-06-29) |
| PA [auth AT] | SCOP2 Family | Ribosomal protein L25-like | 8096331 | 4002376 | SCOP2 (2022-06-29) |
| PA [auth AT] | SCOP2 Superfamily | Ribosomal protein L25-like | 8096332 | 3001161 | SCOP2 (2022-06-29) |
| NA [auth AR] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8086048 | 3000210 | SCOP2B (2022-06-29) |
| D [auth Ad] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8083394 | 3001473 | SCOP2B (2022-06-29) |
| MA [auth AQ] | SCOP2B Superfamily | Ribosomal protein L22 | 8076728 | 3001078 | SCOP2B (2022-06-29) |
| JA [auth AN] | SCOP2 Family | Ribosomal protein L19 | 8082424 | 4001761 | SCOP2 (2022-06-29) |
| JA [auth AN] | SCOP2 Superfamily | Translation proteins SH3-like KOW motif containing domain | 8082425 | 3000334 | SCOP2 (2022-06-29) |
| IA [auth AM] | SCOP2B Superfamily | Translational machinery components | 8074010 | 3000571 | SCOP2B (2022-06-29) |
| GA [auth AK] | SCOP2 Family | Ribosomal protein L16p | 8076042 | 4003717 | SCOP2 (2022-06-29) |
| GA [auth AK] | SCOP2 Superfamily | Ribosomal protein L16p/L10e | 8076043 | 3000884 | SCOP2 (2022-06-29) |
| FA [auth AJ] | SCOP2 Family | Ribosomal proteins L15p and L18e | 8070556 | 4003555 | SCOP2 (2022-06-29) |
| FA [auth AJ] | SCOP2 Superfamily | Ribosomal proteins L15p and L18e | 8070557 | 3001045 | SCOP2 (2022-06-29) |
| DA [auth AH] | SCOP2B Superfamily | Ribosomal protein L13 | 8066061 | 3001134 | SCOP2B (2022-06-29) |
| BA [auth AF] | SCOP2B Superfamily | RL5-like | 8093894 | 3001709 | SCOP2B (2022-06-29) |
| Z [auth AD] | SCOP2B Superfamily | Translational proteins | 8100942 | 3000811 | SCOP2B (2022-06-29) |
| U [auth Au] | SCOP2 Family | Ribosomal protein S21 | 8096095 | 4006173 | SCOP2 (2022-06-29) |
| U [auth Au] | SCOP2 Superfamily | Ribosomal protein S21 | 8096096 | 3002159 | SCOP2 (2022-06-29) |
| B [auth Ab] | SCOP2 Family | Ribosomal protein S2-like | 8096093 | 4003744 | SCOP2 (2022-06-29) |
| B [auth Ab] | SCOP2 Superfamily | SIS domain/Ribosomal protein S2-like | 8096094 | 3001397 | SCOP2 (2022-06-29) |
| Q [auth Aq] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8059274 | 3000135 | SCOP2B (2022-06-29) |
| P [auth Ap] | SCOP2B Superfamily | Ribosomal protein S16 | 8095313 | 3000680 | SCOP2B (2022-06-29) |
| O [auth Ao] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8072619 | 3001284 | SCOP2B (2022-06-29) |
| N [auth An] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8093912 | 3000068 | SCOP2B (2022-06-29) |
| M [auth Am] | SCOP2B Superfamily | S13-like H2TH domain | 8094106 | 3000053 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth Ac] | Ribosomal_S3_C | e5ngmAc1 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: Ribosomal_S3_C | ECOD (1.6) |
| C [auth Ac] | KH_2_1 | e5ngmAc2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: KH_2_1 | ECOD (1.6) |
| G [auth Ag] | Ribosomal_S7_1 | e5ngmAg1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: Ribosomal_S7_1 | ECOD (1.6) |
| J [auth Aj] | Ribosomal_S10 | e5ngmAj1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10 | ECOD (1.6) |
| K [auth Ak] | Ribosomal_S11 | e5ngmAk1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_S11 | ECOD (1.6) |
| L [auth Al] | Ribosom_S12_S23 | e5ngmAl1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosom_S12_S23 | ECOD (1.6) |
| S [auth As] | Ribosomal_S19 | e5ngmAs1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: Ribosomal_S19 | ECOD (1.6) |
| HA [auth AL] | Ribosomal_L17_1 | e5ngmAL1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: Ribosomal_L17_1 | ECOD (1.6) |
| KA [auth AO] | Ribosomal_L20 | e5ngmAO1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: Ribosomal_L20 | ECOD (1.6) |
| LA [auth AP] | Ribosomal_L21p | e5ngmAP1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: Ribosomal_L21p | ECOD (1.6) |
| OA [auth AS] | ribosomal_L24_1 | e5ngmAS1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: ribosomal_L24_1 | ECOD (1.6) |
| RA [auth AV] | Ribosomal_L28 | e5ngmAV1 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: Ribosomal_L28 | ECOD (1.6) |
| SA [auth AW] | Ribosomal_L29 | e5ngmAW1 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: Ribosomal_L29 | ECOD (1.6) |
| TA [auth AX] | Ribosomal_L30 | e5ngmAX1 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: Ribosomal_L30 | ECOD (1.6) |
| WA [auth A1] | Ribosomal_L33 | e5ngmA11 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L33 | ECOD (1.6) |
| I [auth Ai] | Ribosomal_S9 | e5ngmAi1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S9 | ECOD (1.6) |
| H [auth Ah] | Ribosomal_S8_N | e5ngmAh1 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: Ribosomal_S8_N | ECOD (1.6) |
| H [auth Ah] | Ribosomal_S8_C | e5ngmAh2 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: Ribosomal_S8_C | ECOD (1.6) |
| F [auth Af] | Ribosomal_S6 | e5ngmAf1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: Ribosomal_S6 | ECOD (1.6) |
| ZA [auth A4] | Ribosomal_L36 | e5ngmA41 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: Ribosomal_L36 | ECOD (1.6) |
| YA [auth A3] | Ribosomal_L35p | e5ngmA31 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: Ribosomal_L35p | ECOD (1.6) |
| XA [auth A2] | Ribosomal_L34 | e5ngmA21 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: Ribosomal_L34 | ECOD (1.6) |
| E [auth Ae] | Ribosomal_S5_C | e5ngmAe1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S5_C | ECOD (1.6) |
| E [auth Ae] | Ribosomal_S5 | e5ngmAe2 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: Ribosomal_S5 | ECOD (1.6) |
| VA [auth AZ] | Ribosomal_L32p | e5ngmAZ1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L32p | ECOD (1.6) |
| UA [auth AY] | Ribosomal_L31 | e5ngmAY1 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: Ribosomal_L31 | ECOD (1.6) |
| QA [auth AU] | Ribosomal_L27 | e5ngmAU1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: Ribosomal_L27 | ECOD (1.6) |
| PA [auth AT] | Ribosomal_L25p | e5ngmAT1 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: Ribosomal_L25p | ECOD (1.6) |
| NA [auth AR] | Ribosomal_L23_2 | e5ngmAR1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L23_2 | ECOD (1.6) |
| D [auth Ad] | S4 | e5ngmAd1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: S4 | ECOD (1.6) |
| MA [auth AQ] | Ribosomal_L22 | e5ngmAQ1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: Ribosomal_L22 | ECOD (1.6) |
| JA [auth AN] | Ribosomal_L19 | e5ngmAN1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L19 | ECOD (1.6) |
| IA [auth AM] | Ribosomal_L18p | e5ngmAM1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_L18p | ECOD (1.6) |
| GA [auth AK] | Ribosomal_L16 | e5ngmAK1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: Ribosomal_L16 | ECOD (1.6) |
| FA [auth AJ] | Ribosomal_L27A | e5ngmAJ1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L27A | ECOD (1.6) |
| EA [auth AI] | Ribosomal_L14 | e5ngmAI1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_L14 | ECOD (1.6) |
| DA [auth AH] | Ribosomal_L13 | e5ngmAH1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: Ribosomal_L13 | ECOD (1.6) |
| CA [auth AG] | Ribosomal_L6 | e5ngmAG2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6 | ECOD (1.6) |
| CA [auth AG] | Ribosomal_L6_1 | e5ngmAG1 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6_1 | ECOD (1.6) |
| BA [auth AF] | Ribosomal_L5_C | e5ngmAF1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: Ribosomal_L5_C | ECOD (1.6) |
| AA [auth AE] | Ribosomal_L4 | e5ngmAE1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: Ribosomal_L4 | ECOD (1.6) |
| Z [auth AD] | Ribosomal_L3 | e5ngmAD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L3 | ECOD (1.6) |
| Y [auth AC] | Ribosomal_L2_1 | e5ngmAC2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_L2_1 | ECOD (1.6) |
| Y [auth AC] | Ribosomal_L2_C | e5ngmAC1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L2_C | ECOD (1.6) |
| V [auth Av] | Ribosom_S30AE_C | e5ngmAv2 | A: a+b two layers | X: Ribosome-associated factor Y (From Topology) | H: Ribosome-associated factor Y (From Topology) | T: Ribosome-associated factor Y | F: Ribosom_S30AE_C | ECOD (1.6) |
| V [auth Av] | Ribosomal_S30AE | e5ngmAv1 | A: a+b two layers | X: dsRBD-like | H: Ribosome binding protein Y (YfiA homologue) (From Topology) | T: Ribosome binding protein Y (YfiA homologue) | F: Ribosomal_S30AE | ECOD (1.6) |
| U [auth Au] | Ribosomal_S21 | e5ngmAu1 | A: extended segments | X: 30S ribosomal protein S21 (From Topology) | H: 30S ribosomal protein S21 (From Topology) | T: 30S ribosomal protein S21 | F: Ribosomal_S21 | ECOD (1.6) |
| T [auth At] | Ribosomal_S20p | e5ngmAt1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: Ribosomal_S20p | ECOD (1.6) |
| B [auth Ab] | Ribosomal_S2 | e5ngmAb1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: Ribosomal_S2 | ECOD (1.6) |
| R [auth Ar] | Ribosomal_S18 | e5ngmAr1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
| Q [auth Aq] | Ribosomal_S17_1 | e5ngmAq1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S17_1 | ECOD (1.6) |
| P [auth Ap] | Ribosomal_S16_1 | e5ngmAp1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: Ribosomal_S16_1 | ECOD (1.6) |
| O [auth Ao] | Ribosomal_S15_1 | e5ngmAo1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_1 | ECOD (1.6) |
| N [auth An] | Ribosomal_S14 | e5ngmAn1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_S14 | ECOD (1.6) |
| M [auth Am] | Ribosomal_S13_1 | e5ngmAm1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: Ribosomal_S13_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| HA [auth AL] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| HA [auth AL] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| KA [auth AO] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| KA [auth AO] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| LA [auth AP] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| LA [auth AP] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| OA [auth AS] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| OA [auth AS] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| RA [auth AV] | PF02482 | Sigma 54 modulation protein / S30EA ribosomal protein (Ribosomal_S30AE) | Sigma 54 modulation protein / S30EA ribosomal protein | - | Family |
| RA [auth AV] | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
| SA [auth AW] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| TA [auth AX] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| WA [auth A1] | PF00471 | Ribosomal protein L33 (Ribosomal_L33) | Ribosomal protein L33 | - | Family |
| ZA [auth A4] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | Domain | |
| YA [auth A3] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| XA [auth A2] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| VA [auth AZ] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
| UA [auth AY] | PF01197 | Ribosomal protein L31 (Ribosomal_L31) | Ribosomal protein L31 | - | Family |
| QA [auth AU] | PF01165 | Ribosomal protein S21 (Ribosomal_S21) | Ribosomal protein S21 | - | Family |
| PA [auth AT] | PF01649 | Ribosomal protein S20 (Ribosomal_S20p) | Ribosomal protein S20 | - | Family |
| NA [auth AR] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| MA [auth AQ] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| MA [auth AQ] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| JA [auth AN] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| JA [auth AN] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| IA [auth AM] | PF00861 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p) | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | - | Family |
| GA [auth AK] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| GA [auth AK] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| FA [auth AJ] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| FA [auth AJ] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| EA [auth AI] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| EA [auth AI] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| DA [auth AH] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| DA [auth AH] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| CA [auth AG] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| CA [auth AG] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| BA [auth AF] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| BA [auth AF] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | Domain | |
| BA [auth AF] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| AA [auth AE] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| AA [auth AE] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| AA [auth AE] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| Z [auth AD] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| Z [auth AD] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| Z [auth AD] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| Y [auth AC] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| Y [auth AC] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| Y [auth AC] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| Y [auth AC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| X [auth AB] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |














