Crystal Structure of swapped human Nck SH3.1 domain, 1.8A, triclinic
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Z | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| Y | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| X | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| W | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| AA [auth 1] | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | SH3-domain | 8065169 | 3000153 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Z | SH3_1_1 | e5qu6Z1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| Y | SH3_1_1 | e5qu6Y1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| X | SH3_1_1 | e5qu6X1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| W | SH3_1_1 | e5qu6W1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| V | SH3_1_1 | e5qu6V1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| U | SH3_1_1 | e5qu6U1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| T | SH3_1_1 | e5qu6T1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| S | SH3_1_1 | e5qu6S1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| R | SH3_1_1 | e5qu6R1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| Q | SH3_1_1 | e5qu6Q1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| P | SH3_1_1 | e5qu6P1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| O | SH3_1_1 | e5qu6O1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| N | SH3_1_1 | e5qu6N1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| M | SH3_1_1 | e5qu6M1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| L | SH3_1_1 | e5qu6L1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| K | SH3_1_1 | e5qu6K1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| J | SH3_1_1 | e5qu6J1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| I | SH3_1_1 | e5qu6I1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| H | SH3_1_1 | e5qu6H1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| G | SH3_1_1 | e5qu6G1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| F | SH3_1_1 | e5qu6F1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| E | SH3_1_1 | e5qu6E1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| D | SH3_1_1 | e5qu6D1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| C | SH3_1_1 | e5qu6C1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| BA [auth 2] | SH3_1_1 | e5qu621 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| B | SH3_1_1 | e5qu6B1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| AA [auth 1] | SH3_1_1 | e5qu611 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
| A | SH3_1_1 | e5qu6A1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_1_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00018 | SH3 domain (SH3_1) | SH3 domain | SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR035564 | Nck1, SH3 domain 2 | Domain | |
| IPR036028 | SH3-like domain superfamily | Homologous Superfamily | |
| IPR035562 | Nck1, SH3 domain 1 | Domain | |
| IPR001452 | SH3 domain | Domain | |
| IPR036860 | SH2 domain superfamily | Homologous Superfamily | |
| IPR035882 | Nck1, SH2 domain | Domain | |
| IPR000980 | SH2 domain | Domain | |
| IPR035565 | Nck1, SH3 domain 3 | Domain | |
| IPR051184 | Tyrosine-phosphorylated adapter molecule | Family | |
| IPR017304 | Cytoplasmic protein NCK | Family |
Pharos: Disease Associations Pharos Homepage Annotation
| Chains | Drug Target   | Associated Disease |
|---|---|---|
| :  P16333 |














