5Z49 | pdb_00005z49

Crystal structure of the effector-binding domain of Synechococcus elongatus CmpR in complex with ribulose-1,5-bisphosphate

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]LysR_substratee5z49B1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: LysR_substrateECOD (1.6)
B [auth A]LysR_substratee5z49A1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: LysR_substrateECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
B [auth A]		PF03466LysR substrate binding domain (LysR_substrate)LysR substrate binding domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
B [auth A]		HTH-type transcriptional activator CmpR -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
B [auth A]		IPR005119LysR, substrate-bindingDomain
A [auth B],
B [auth A]		IPR000847LysR, HTH, N-terminal domainDomain
A [auth B],
B [auth A]		IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A [auth B],
B [auth A]		IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily