PAN-proteasome in state 2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| HA [auth J] | SCOP2B Superfamily | HypC/PAN OB-fold domain-like | 8091041 | 3000354 | SCOP2B (2022-06-29) |
| GA [auth M] | SCOP2B Superfamily | HypC/PAN OB-fold domain-like | 8091041 | 3000354 | SCOP2B (2022-06-29) |
| FA [auth L] | SCOP2B Superfamily | HypC/PAN OB-fold domain-like | 8091041 | 3000354 | SCOP2B (2022-06-29) |
| EA [auth K] | SCOP2B Superfamily | HypC/PAN OB-fold domain-like | 8091041 | 3000354 | SCOP2B (2022-06-29) |
| DA [auth I] | SCOP2B Superfamily | HypC/PAN OB-fold domain-like | 8091041 | 3000354 | SCOP2B (2022-06-29) |
| CA [auth H] | SCOP2B Superfamily | HypC/PAN OB-fold domain-like | 8091041 | 3000354 | SCOP2B (2022-06-29) |
| Z [auth m] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| Y [auth 6] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| X [auth l] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| W [auth 5] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| V [auth k] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| U [auth 4] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| T [auth j] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| S [auth 3] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| R [auth i] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| Q [auth 2] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| P [auth h] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| O [auth 1] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| BA [auth n] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| AA [auth 7] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032232 | 3000131 | SCOP2B (2022-06-29) |
| N [auth g] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| M [auth G] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| L [auth f] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| K [auth F] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| J [auth e] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| I [auth E] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| H [auth d] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| G [auth D] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| F [auth c] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| D [auth b] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| B [auth a] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Class II glutamine amidotransferases | 8032229 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| HA [auth J] | 26Sp45 | e6he9J3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: 26Sp45 | ECOD (1.6) |
| HA [auth J] | PRK03992 | e6he9J1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
| HA [auth J] | Sigma54_activat | e6he9J2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
| GA [auth M] | 26Sp45 | e6he9M3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: 26Sp45 | ECOD (1.6) |
| GA [auth M] | PRK03992 | e6he9M2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
| GA [auth M] | Sigma54_activat | e6he9M1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
| FA [auth L] | 26Sp45 | e6he9L3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: 26Sp45 | ECOD (1.6) |
| FA [auth L] | PRK03992 | e6he9L1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
| FA [auth L] | Sigma54_activat | e6he9L2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
| EA [auth K] | 26Sp45 | e6he9K3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: 26Sp45 | ECOD (1.6) |
| EA [auth K] | PRK03992 | e6he9K1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
| EA [auth K] | Sigma54_activat | e6he9K2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
| DA [auth I] | 26Sp45 | e6he9I1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: 26Sp45 | ECOD (1.6) |
| DA [auth I] | PRK03992 | e6he9I2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
| DA [auth I] | Sigma54_activat | e6he9I3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
| CA [auth H] | 26Sp45 | e6he9H2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: 26Sp45 | ECOD (1.6) |
| CA [auth H] | PRK03992 | e6he9H3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PRK03992 | ECOD (1.6) |
| CA [auth H] | Sigma54_activat | e6he9H1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
| Z [auth m] | Proteasome | e6he9m1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| Y [auth 6] | Proteasome | e6he961 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| X [auth l] | Proteasome | e6he9l1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| W [auth 5] | Proteasome | e6he951 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| V [auth k] | Proteasome | e6he9k1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| U [auth 4] | Proteasome | e6he941 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| T [auth j] | Proteasome | e6he9j1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| S [auth 3] | Proteasome | e6he931 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| R [auth i] | Proteasome | e6he9i1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| Q [auth 2] | Proteasome | e6he921 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| P [auth h] | Proteasome | e6he9h1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| O [auth 1] | Proteasome | e6he911 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| BA [auth n] | Proteasome | e6he9n1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| AA [auth 7] | Proteasome | e6he971 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| N [auth g] | Proteasome | e6he9g1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| M [auth G] | Proteasome | e6he9G1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| L [auth f] | Proteasome | e6he9f1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| K [auth F] | Proteasome | e6he9F1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| J [auth e] | Proteasome | e6he9e1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| I [auth E] | Proteasome | e6he9E1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| H [auth d] | Proteasome | e6he9d1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| G [auth D] | Proteasome | e6he9D1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| F [auth c] | Proteasome | e6he9c1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| E [auth C] | Proteasome | e6he9C1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| D [auth b] | Proteasome | e6he9b1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| C [auth B] | Proteasome | e6he9B1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| B [auth a] | Proteasome | e6he9a1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| A | Proteasome | e6he9A1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
| PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain | |
| PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain | |
| PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain | |
| PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
| PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
| PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |














