Annotations: 6P7X

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth E]	SCOP2B Superfamily	lambda integrase clamp domain-like	8053776	3000550	SCOP2B (2022-06-29)
A [auth E]	SCOP2B Superfamily	DNA breaking-rejoining enzymes	8053767	3001127	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth E]	NDC10_II_C_1	e6p7xE3	A: alpha arrays	X: HTH	H: HTH	T: DNA breaking-rejoining enzymes	F: NDC10_II_C_1	ECOD (1.6)
A [auth E]	NDC10_II_N	e6p7xE1	A: alpha arrays	X: HTH	H: HTH	T: DNA breaking-rejoining enzymes	F: NDC10_II_N	ECOD (1.6)
A [auth E]	Ndc10_1	e6p7xE2	A: alpha arrays	X: lambda integrase-N-like	H: lambda integrase-N (From Topology)	T: lambda integrase-N	F: Ndc10_1	ECOD (1.6)
C [auth D]	Skp1_POZ	e6p7xD1	A: a+b two layers	X: POZ domain (From Topology)	H: POZ domain (From Topology)	T: POZ domain	F: Skp1_POZ	ECOD (1.6)
D [auth B]	Cep3	e6p7xB1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Cep3	ECOD (1.6)
E [auth A]	Cep3	e6p7xA1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Cep3	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth E]	PF16787	Centromere DNA-binding protein complex CBF3 subunit, domain 2 (NDC10_II)	Centromere DNA-binding protein complex CBF3 subunit, domain 2	NDC10_II is a the second of five domains on the Kluyveromyces lactis Ndc10 protein. Each subunit of the Ndc10 dimer binds a separate fragment of DNA, suggesting that Ndc10 stabilises a DNA loop at the centromere [1].	Domain
C [auth D]	PF01466	Skp1 family, dimerisation domain (Skp1)	Skp1 family, dimerisation domain		Domain
D [auth B], E [auth A]	PF16846	Centromere DNA-binding protein complex CBF3 subunit B (Cep3)	Centromere DNA-binding protein complex CBF3 subunit B	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth E]	Ndc10	DNA binding binding nucleic acid binding	-	-
B [auth C]	Ctf13	-	-	-
C [auth D]	Skp1	-	catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process cellular process macromolecule metabolic process protein metabolic process protein ubiquitination catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process cellular process macromolecule metabolic process protein metabolic process protein ubiquitination macromolecule modification post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal	-
D [auth B], E [auth A]	Cep3	DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding cation binding transition metal ion binding zinc ion binding DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity	-	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth E]	IPR038279	Ndc10, domain 2 superfamily	Homologous Superfamily
A [auth E]	IPR031872	Ndc10, domain 2	Domain
A [auth E]	IPR022210	Transcription activator GCR1-like domain	Domain
C [auth D]	IPR016073	SKP1 component, POZ domain	Domain
C [auth D]	IPR016072	SKP1 component, dimerisation	Domain
C [auth D]	IPR036296	SKP1-like, dimerisation domain superfamily	Homologous Superfamily
C [auth D]	IPR011333	SKP1/BTB/POZ domain superfamily	Homologous Superfamily
C [auth D]	IPR001232	S-phase kinase-associated protein 1-like	Family
C [auth D]	IPR016897	S-phase kinase-associated protein 1	Family
D [auth B], E [auth A]	IPR051430	Fungal Transcription Factors for Environmental Response	Family
D [auth B], E [auth A]	IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	Homologous Superfamily
D [auth B], E [auth A]	IPR001138	Zn(2)Cys(6) fungal-type DNA-binding domain	Domain
D [auth B], E [auth A]	IPR031760	Centromere DNA-binding protein complex CBF3 subunit B, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.