Structure of Ctf4 trimer in complex with three CMG helicases
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth X] | Mcl1_mid | e6ptoX2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: Mcl1_mid | ECOD (1.6) |
| A [auth X] | KOG1274_1 | e6ptoX1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology) | T: DNA polymerase alpha-binding protein Ctf4 C-terminal domain | F: KOG1274_1 | ECOD (1.6) |
| B [auth Y] | Mcl1_mid | e6ptoY1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: Mcl1_mid | ECOD (1.6) |
| B [auth Y] | KOG1274_1 | e6ptoY2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology) | T: DNA polymerase alpha-binding protein Ctf4 C-terminal domain | F: KOG1274_1 | ECOD (1.6) |
| C [auth Z] | Mcl1_mid | e6ptoZ1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 6-bladed | F: Mcl1_mid | ECOD (1.6) |
| C [auth Z] | KOG1274_1 | e6ptoZ2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology) | T: DNA polymerase alpha-binding protein Ctf4 C-terminal domain | F: KOG1274_1 | ECOD (1.6) |
| O [auth A] | Sld5_1 | e6ptoA2 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_1 | ECOD (1.6) |
| O [auth A] | SLD5_C_2 | e6ptoA1 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: SLD5_C_2 | ECOD (1.6) |
| Z [auth a] | Sld5_1 | e6ptoa1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_1 | ECOD (1.6) |
| Z [auth a] | SLD5_C_2 | e6ptoa2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: SLD5_C_2 | ECOD (1.6) |
| D [auth n] | Sld5_1 | e6pton1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_1 | ECOD (1.6) |
| D [auth n] | SLD5_C_2 | e6pton2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: SLD5_C_2 | ECOD (1.6) |
| AA [auth b] | Sld5 | e6ptob1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
| AA [auth b] | KOG4071 | e6ptob2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: KOG4071 | ECOD (1.6) |
| E [auth o] | Sld5 | e6ptoo2 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
| E [auth o] | KOG4071 | e6ptoo1 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: KOG4071 | ECOD (1.6) |
| P [auth B] | Sld5 | e6ptoB1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
| P [auth B] | KOG4071 | e6ptoB2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: KOG4071 | ECOD (1.6) |
| BA [auth c] | Sld5 | e6ptoc1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
| BA [auth c] | COG5138 | e6ptoc2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: COG5138 | ECOD (1.6) |
| F [auth p] | Sld5 | e6ptop1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
| F [auth p] | COG5138 | e6ptop2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: COG5138 | ECOD (1.6) |
| Q [auth C] | Sld5 | e6ptoC1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF2 C-terminal domain-like | F: Sld5 | ECOD (1.6) |
| Q [auth C] | COG5138 | e6ptoC2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: COG5138 | ECOD (1.6) |
| CA [auth d] | Sld5_2 | e6ptod1 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_2 | ECOD (1.6) |
| CA [auth d] | SLD5_C_1 | e6ptod2 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: SLD5_C_1 | ECOD (1.6) |
| G [auth q] | Sld5_2 | e6ptoq2 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_2 | ECOD (1.6) |
| G [auth q] | SLD5_C_1 | e6ptoq1 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: SLD5_C_1 | ECOD (1.6) |
| R [auth D] | Sld5_2 | e6ptoD2 | A: alpha bundles | X: GINS helical bundle-like (From Homology) | H: GINS helical bundle-like | T: PSF1 N-terminal domain-like | F: Sld5_2 | ECOD (1.6) |
| R [auth D] | SLD5_C_1 | e6ptoD1 | A: a+b two layers | X: L9 N-domain-like | H: GINS/PriA/YqbF domain (From Topology) | T: GINS/PriA/YqbF domain | F: SLD5_C_1 | ECOD (1.6) |
| DA [auth r] | CDC45_2nd | e6ptor3 | A: alpha arrays | X: HhH/H2TH | H: Cdc45 CID domain (From Topology) | T: Cdc45 CID domain | F: CDC45_2nd | ECOD (1.6) |
| DA [auth r] | CDC45_3rd | e6ptor1 | A: a+b three layers | X: C-terminal domain in DHH phosphoesterases (From Topology) | H: C-terminal domain in DHH phosphoesterases (From Topology) | T: C-terminal domain in DHH phosphoesterases | F: CDC45_3rd | ECOD (1.6) |
| DA [auth r] | CDC45_1st | e6ptor2 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: DHH phosphoesterases | F: CDC45_1st | ECOD (1.6) |
| H [auth e] | CDC45_2nd | e6ptoe3 | A: alpha arrays | X: HhH/H2TH | H: Cdc45 CID domain (From Topology) | T: Cdc45 CID domain | F: CDC45_2nd | ECOD (1.6) |
| H [auth e] | CDC45_3rd | e6ptoe2 | A: a+b three layers | X: C-terminal domain in DHH phosphoesterases (From Topology) | H: C-terminal domain in DHH phosphoesterases (From Topology) | T: C-terminal domain in DHH phosphoesterases | F: CDC45_3rd | ECOD (1.6) |
| H [auth e] | CDC45_1st | e6ptoe1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: DHH phosphoesterases | F: CDC45_1st | ECOD (1.6) |
| S [auth E] | CDC45_2nd | e6ptoE1 | A: alpha arrays | X: HhH/H2TH | H: Cdc45 CID domain (From Topology) | T: Cdc45 CID domain | F: CDC45_2nd | ECOD (1.6) |
| S [auth E] | CDC45_3rd | e6ptoE3 | A: a+b three layers | X: C-terminal domain in DHH phosphoesterases (From Topology) | H: C-terminal domain in DHH phosphoesterases (From Topology) | T: C-terminal domain in DHH phosphoesterases | F: CDC45_3rd | ECOD (1.6) |
| S [auth E] | CDC45_1st | e6ptoE2 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: DHH phosphoesterases | F: CDC45_1st | ECOD (1.6) |
| EA [auth F] | MCM_OB | e6ptoF1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| EA [auth F] | MCM_C | e6ptoF2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| EA [auth F] | MCM_N | e6ptoF4 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| EA [auth F] | MCM_AAA | e6ptoF5 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| EA [auth F] | MCM_OB_4 | e6ptoF3 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_4 | ECOD (1.6) |
| T [auth 2] | MCM_OB | e6pto24 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| T [auth 2] | MCM_C | e6pto22 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| T [auth 2] | MCM_N | e6pto21 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| T [auth 2] | MCM_AAA | e6pto25 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| T [auth 2] | MCM_OB_4 | e6pto23 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_4 | ECOD (1.6) |
| I [auth h] | MCM_OB | e6ptoh2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| I [auth h] | MCM_C | e6ptoh3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| I [auth h] | MCM_N | e6ptoh5 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| I [auth h] | MCM_AAA | e6ptoh4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| I [auth h] | MCM_OB_4 | e6ptoh1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_4 | ECOD (1.6) |
| FA [auth G] | MCM_OB | e6ptoG3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| FA [auth G] | MCM_C | e6ptoG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| FA [auth G] | MCM_N | e6ptoG4 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| FA [auth G] | MCM_AAA | e6ptoG2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| FA [auth G] | KOG0479 | e6ptoG5 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0479 | ECOD (1.6) |
| J [auth i] | MCM_OB | e6ptoi5 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| J [auth i] | MCM_C | e6ptoi3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| J [auth i] | MCM_N | e6ptoi2 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| J [auth i] | MCM_AAA | e6ptoi4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| J [auth i] | KOG0479 | e6ptoi1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0479 | ECOD (1.6) |
| U [auth 3] | MCM_OB | e6pto35 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| U [auth 3] | MCM_C | e6pto34 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| U [auth 3] | MCM_N | e6pto31 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| U [auth 3] | MCM_AAA | e6pto33 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| U [auth 3] | KOG0479 | e6pto32 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0479 | ECOD (1.6) |
| GA [auth H] | MCM_OB | e6ptoH5 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| GA [auth H] | MCM_C | e6ptoH1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| GA [auth H] | HTH_ARSR_like_1 | e6ptoH6 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: HTH_ARSR_like_1 | ECOD (1.6) |
| GA [auth H] | MCM_N | e6ptoH4 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| GA [auth H] | MCM_AAA | e6ptoH3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| GA [auth H] | MCM_OB_1 | e6ptoH2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_1 | ECOD (1.6) |
| K [auth j] | MCM_OB | e6ptoj2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| K [auth j] | MCM_C | e6ptoj5 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| K [auth j] | HTH_ARSR_like_1 | e6ptoj3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: HTH_ARSR_like_1 | ECOD (1.6) |
| K [auth j] | MCM_N | e6ptoj1 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| K [auth j] | MCM_AAA | e6ptoj6 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| K [auth j] | MCM_OB_1 | e6ptoj4 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_1 | ECOD (1.6) |
| V [auth 4] | MCM_OB | e6pto41 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| V [auth 4] | MCM_C | e6pto42 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| V [auth 4] | HTH_ARSR_like_1 | e6pto46 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: HTH_ARSR_like_1 | ECOD (1.6) |
| V [auth 4] | MCM_N | e6pto44 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| V [auth 4] | MCM_AAA | e6pto43 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| V [auth 4] | MCM_OB_1 | e6pto45 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_1 | ECOD (1.6) |
| HA [auth I] | MCM_OB | e6ptoI2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| HA [auth I] | MCM_C | e6ptoI4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| HA [auth I] | MCM_N | e6ptoI5 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| HA [auth I] | MCM_AAA | e6ptoI1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| HA [auth I] | MCM_OB_2 | e6ptoI3 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_2 | ECOD (1.6) |
| L [auth k] | MCM_OB | e6ptok3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| L [auth k] | MCM_C | e6ptok1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| L [auth k] | MCM_N | e6ptok4 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| L [auth k] | MCM_AAA | e6ptok5 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| L [auth k] | MCM_OB_2 | e6ptok2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_2 | ECOD (1.6) |
| W [auth 5] | MCM_OB | e6pto51 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| W [auth 5] | MCM_C | e6pto53 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| W [auth 5] | MCM_N | e6pto55 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| W [auth 5] | MCM_AAA | e6pto52 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| W [auth 5] | MCM_OB_2 | e6pto54 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_2 | ECOD (1.6) |
| IA [auth J] | MCM_OB | e6ptoJ3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| IA [auth J] | MCM_C | e6ptoJ2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| IA [auth J] | MCM_N | e6ptoJ5 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| IA [auth J] | MCM_AAA | e6ptoJ1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| IA [auth J] | MCM_OB_2 | e6ptoJ4 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_2 | ECOD (1.6) |
| M [auth l] | MCM_OB | e6ptol5 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| M [auth l] | MCM_C | e6ptol4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| M [auth l] | MCM_N | e6ptol3 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| M [auth l] | MCM_AAA | e6ptol2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| M [auth l] | MCM_OB_2 | e6ptol1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_2 | ECOD (1.6) |
| X [auth 6] | MCM_OB | e6pto61 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| X [auth 6] | MCM_C | e6pto64 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| X [auth 6] | MCM_N | e6pto63 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
| X [auth 6] | MCM_AAA | e6pto62 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| X [auth 6] | MCM_OB_2 | e6pto65 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_2 | ECOD (1.6) |
| JA [auth K] | MCM_OB | e6ptoK3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| JA [auth K] | MCM_C | e6ptoK5 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| JA [auth K] | MCM_N_1 | e6ptoK4 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N_1 | ECOD (1.6) |
| JA [auth K] | MCM_AAA | e6ptoK1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| JA [auth K] | KOG0482 | e6ptoK2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0482 | ECOD (1.6) |
| N [auth m] | MCM_OB | e6ptom4 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| N [auth m] | MCM_C | e6ptom2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| N [auth m] | MCM_N_1 | e6ptom3 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N_1 | ECOD (1.6) |
| N [auth m] | MCM_AAA | e6ptom5 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| N [auth m] | KOG0482 | e6ptom1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0482 | ECOD (1.6) |
| Y [auth 7] | MCM_OB | e6pto74 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
| Y [auth 7] | MCM_C | e6pto73 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
| Y [auth 7] | MCM_N_1 | e6pto71 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N_1 | ECOD (1.6) |
| Y [auth 7] | MCM_AAA | e6pto72 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
| Y [auth 7] | KOG0482 | e6pto75 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0482 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth X], B [auth Y], C [auth Z] | PF12341 | Minichromosome loss protein, Mcl1, middle region (Mcl1_mid) | Minichromosome loss protein, Mcl1, middle region | - | Repeat |
| A [auth X], B [auth Y], C [auth Z] | PF20946 | DNA polymerase alpha-binding protein Ctf4, C-terminal domain (Ctf4_C) | DNA polymerase alpha-binding protein Ctf4, C-terminal domain | This domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the ... | Domain |
| D [auth n], O [auth A], Z [auth a] | PF05916 | GINS complex protein helical bundle domain (Sld5) | GINS complex protein helical bundle domain | This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ... | Domain |
| AA [auth b], E [auth o], P [auth B] | PF05916 | GINS complex protein helical bundle domain (Sld5) | GINS complex protein helical bundle domain | This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ... | Domain |
| BA [auth c], F [auth p], Q [auth C] | PF05916 | GINS complex protein helical bundle domain (Sld5) | GINS complex protein helical bundle domain | This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ... | Domain |
| BA [auth c], F [auth p], Q [auth C] | PF22466 | PSF3 N-terminal domain (PSF3_N) | PSF3 N-terminal domain | This entry represents the GINS/PriA/YqbF domain, which is found in the N-terminal region of the GINS complex protein. The GINS complex is crucial for the establishment of DNA replication forks and replisome progression in eukaryotes. The crystal stru ... | Domain |
| CA [auth d], G [auth q], R [auth D] | PF05916 | GINS complex protein helical bundle domain (Sld5) | GINS complex protein helical bundle domain | This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ... | Domain |
| CA [auth d], G [auth q], R [auth D] | PF16922 | DNA replication complex GINS protein SLD5 C-terminus (SLD5_C) | DNA replication complex GINS protein SLD5 C-terminus | The C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1]. | Domain |
| DA [auth r], H [auth e], S [auth E] | PF02724 | CDC45 (CDC45) | CDC45 | - | Family |
| EA [auth F], I [auth h], T [auth 2] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
| EA [auth F], I [auth h], T [auth 2] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
| EA [auth F], I [auth h], T [auth 2] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
| EA [auth F], I [auth h], T [auth 2] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
| FA [auth G], J [auth i], U [auth 3] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
| FA [auth G], J [auth i], U [auth 3] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
| FA [auth G], J [auth i], U [auth 3] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
| FA [auth G], J [auth i], U [auth 3] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
| GA [auth H], K [auth j], V [auth 4] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
| GA [auth H], K [auth j], V [auth 4] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
| GA [auth H], K [auth j], V [auth 4] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
| GA [auth H], K [auth j], V [auth 4] | PF21128 | MCM4, winged helix domain (WHD_MCM4) | MCM4, winged helix domain | DNA replication licensing factor MCM4 is a component of the MCM2-MCM7 complex which consists of six sequence-related AAA+ type ATPases/helicases that form a heterohexameric ring essential for 'once per cell cycle' DNA replication initiation and elong ... | Domain |
| GA [auth H], K [auth j], V [auth 4] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
| HA [auth I], L [auth k], W [auth 5] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
| HA [auth I], L [auth k], W [auth 5] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
| HA [auth I], L [auth k], W [auth 5] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
| HA [auth I], L [auth k], W [auth 5] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
| IA [auth J], M [auth l], X [auth 6] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
| IA [auth J], M [auth l], X [auth 6] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
| IA [auth J], M [auth l], X [auth 6] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
| IA [auth J], M [auth l], X [auth 6] | PF21128 | MCM4, winged helix domain (WHD_MCM4) | MCM4, winged helix domain | DNA replication licensing factor MCM4 is a component of the MCM2-MCM7 complex which consists of six sequence-related AAA+ type ATPases/helicases that form a heterohexameric ring essential for 'once per cell cycle' DNA replication initiation and elong ... | Domain |
| IA [auth J], M [auth l], X [auth 6] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
| JA [auth K], N [auth m], Y [auth 7] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
| JA [auth K], N [auth m], Y [auth 7] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
| JA [auth K], N [auth m], Y [auth 7] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
| JA [auth K], N [auth m], Y [auth 7] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |














