6SKL | pdb_00006skl

Cryo-EM structure of the CMG Fork Protection Complex at a replication fork - Conformation 1

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth C]	Sld5	e6sklC1	A: alpha bundles	X: GINS helical bundle-like (From Homology)	H: GINS helical bundle-like	T: PSF2 C-terminal domain-like	F: Sld5	ECOD (1.6)
I [auth C]	COG5138	e6sklC2	A: a+b two layers	X: L9 N-domain-like	H: GINS/PriA/YqbF domain (From Topology)	T: GINS/PriA/YqbF domain	F: COG5138	ECOD (1.6)
H [auth B]	Sld5	e6sklB2	A: alpha bundles	X: GINS helical bundle-like (From Homology)	H: GINS helical bundle-like	T: PSF2 C-terminal domain-like	F: Sld5	ECOD (1.6)
H [auth B]	KOG4071	e6sklB1	A: a+b two layers	X: L9 N-domain-like	H: GINS/PriA/YqbF domain (From Topology)	T: GINS/PriA/YqbF domain	F: KOG4071	ECOD (1.6)
G [auth A]	Sld5_1	e6sklA1	A: alpha bundles	X: GINS helical bundle-like (From Homology)	H: GINS helical bundle-like	T: PSF1 N-terminal domain-like	F: Sld5_1	ECOD (1.6)
G [auth A]	SLD5_C_2	e6sklA2	A: a+b two layers	X: L9 N-domain-like	H: GINS/PriA/YqbF domain (From Topology)	T: GINS/PriA/YqbF domain	F: SLD5_C_2	ECOD (1.6)
F [auth 7]	MCM_OB	e6skl74	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: MCM_OB	ECOD (1.6)
F [auth 7]	MCM_C	e6skl75	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: MCM_C	ECOD (1.6)
F [auth 7]	MCM_N_1	e6skl73	A: a+b complex topology	X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)	F: MCM_N_1	ECOD (1.6)
F [auth 7]	MCM_AAA	e6skl72	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MCM_AAA	ECOD (1.6)
F [auth 7]	KOG0482	e6skl71	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: KOG0482	ECOD (1.6)
E [auth 6]	MCM_OB	e6skl63	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: MCM_OB	ECOD (1.6)
E [auth 6]	MCM_C	e6skl64	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: MCM_C	ECOD (1.6)
E [auth 6]	MCM_N	e6skl61	A: a+b complex topology	X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)	F: MCM_N	ECOD (1.6)
E [auth 6]	MCM_AAA	e6skl62	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MCM_AAA	ECOD (1.6)
E [auth 6]	MCM_OB_2	e6skl65	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: MCM_OB_2	ECOD (1.6)
D [auth 5]	MCM_OB	e6skl55	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: MCM_OB	ECOD (1.6)
D [auth 5]	MCM_C	e6skl54	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: MCM_C	ECOD (1.6)
D [auth 5]	MCM_N	e6skl53	A: a+b complex topology	X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)	F: MCM_N	ECOD (1.6)
D [auth 5]	MCM_AAA	e6skl51	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MCM_AAA	ECOD (1.6)
D [auth 5]	MCM_OB_2	e6skl52	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: MCM_OB_2	ECOD (1.6)
C [auth 4]	MCM_OB	e6skl45	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: MCM_OB	ECOD (1.6)
C [auth 4]	MCM_C	e6skl43	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: MCM_C	ECOD (1.6)
C [auth 4]	HTH_ARSR_like_1	e6skl42	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: HTH_ARSR_like_1	ECOD (1.6)
C [auth 4]	MCM_N	e6skl46	A: a+b complex topology	X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)	F: MCM_N	ECOD (1.6)
C [auth 4]	MCM_AAA	e6skl41	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MCM_AAA	ECOD (1.6)
C [auth 4]	MCM_OB_1	e6skl44	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: MCM_OB_1	ECOD (1.6)
B [auth 3]	MCM_OB	e6skl31	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: MCM_OB	ECOD (1.6)
B [auth 3]	MCM_C	e6skl35	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: MCM_C	ECOD (1.6)
B [auth 3]	MCM_N	e6skl32	A: a+b complex topology	X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)	F: MCM_N	ECOD (1.6)
B [auth 3]	MCM_AAA	e6skl34	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MCM_AAA	ECOD (1.6)
B [auth 3]	KOG0479	e6skl33	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: KOG0479	ECOD (1.6)
N [auth H]	Mcl1_mid	e6sklH1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: Mcl1_mid	ECOD (1.6)
N [auth H]	KOG1274_1	e6sklH2	A: alpha superhelices	X: Repetitive alpha hairpins	H: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)	T: DNA polymerase alpha-binding protein Ctf4 C-terminal domain	F: KOG1274_1	ECOD (1.6)
M [auth G]	Mcl1_mid	e6sklG1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: Mcl1_mid	ECOD (1.6)
M [auth G]	KOG1274_1	e6sklG2	A: alpha superhelices	X: Repetitive alpha hairpins	H: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)	T: DNA polymerase alpha-binding protein Ctf4 C-terminal domain	F: KOG1274_1	ECOD (1.6)
L [auth F]	Mcl1_mid	e6sklF2	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 6-bladed	F: Mcl1_mid	ECOD (1.6)
L [auth F]	KOG1274_1	e6sklF1	A: alpha superhelices	X: Repetitive alpha hairpins	H: DNA polymerase alpha-binding protein Ctf4 C-terminal domain (From Topology)	T: DNA polymerase alpha-binding protein Ctf4 C-terminal domain	F: KOG1274_1	ECOD (1.6)
K [auth E]	CDC45_2nd	e6sklE3	A: alpha arrays	X: HhH/H2TH	H: Cdc45 CID domain (From Topology)	T: Cdc45 CID domain	F: CDC45_2nd	ECOD (1.6)
K [auth E]	CDC45_3rd	e6sklE1	A: a+b three layers	X: C-terminal domain in DHH phosphoesterases (From Topology)	H: C-terminal domain in DHH phosphoesterases (From Topology)	T: C-terminal domain in DHH phosphoesterases	F: CDC45_3rd	ECOD (1.6)
K [auth E]	CDC45_1st	e6sklE2	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: DHH phosphoesterases	F: CDC45_1st	ECOD (1.6)
J [auth D]	Sld5_2	e6sklD2	A: alpha bundles	X: GINS helical bundle-like (From Homology)	H: GINS helical bundle-like	T: PSF1 N-terminal domain-like	F: Sld5_2	ECOD (1.6)
J [auth D]	SLD5_C_1	e6sklD1	A: a+b two layers	X: L9 N-domain-like	H: GINS/PriA/YqbF domain (From Topology)	T: GINS/PriA/YqbF domain	F: SLD5_C_1	ECOD (1.6)
A [auth 2]	MCM_OB	e6skl23	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: MCM_OB	ECOD (1.6)
A [auth 2]	MCM_C	e6skl24	A: alpha arrays	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: MCM_C	ECOD (1.6)
A [auth 2]	MCM_N	e6skl22	A: a+b complex topology	X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)	T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)	F: MCM_N	ECOD (1.6)
A [auth 2]	MCM_AAA	e6skl25	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MCM_AAA	ECOD (1.6)
A [auth 2]	MCM_OB_4	e6skl21	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: MCM_OB_4	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
I [auth C]	PF05916	GINS complex protein helical bundle domain (Sld5)	GINS complex protein helical bundle domain	This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...	This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].	Domain
I [auth C]	PF22466	PSF3 N-terminal domain (PSF3_N)	PSF3 N-terminal domain	This entry represents the GINS/PriA/YqbF domain, which is found in the N-terminal region of the GINS complex protein. The GINS complex is crucial for the establishment of DNA replication forks and replisome progression in eukaryotes. The crystal stru ...	This entry represents the GINS/PriA/YqbF domain, which is found in the N-terminal region of the GINS complex protein. The GINS complex is crucial for the establishment of DNA replication forks and replisome progression in eukaryotes. The crystal structure of the human GINS complex reveals a heterotetrameric assembly with a pseudo symmetrical layered structure. The complex consists of two heterodimers that create four subunit-subunit interfaces. The subunit structures of the heterodimers consist of two alternating domains, an alpha-helix-rich (A) domain Pfam:PF05916 and a beta-strand-rich (B) domain (this entry).	Domain
H [auth B]	PF05916	GINS complex protein helical bundle domain (Sld5)	GINS complex protein helical bundle domain	This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...	This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].	Domain
G [auth A]	PF05916	GINS complex protein helical bundle domain (Sld5)	GINS complex protein helical bundle domain	This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...	This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].	Domain
F [auth 7]	PF14551	MCM N-terminal domain (MCM_N)	MCM N-terminal domain	This family contains the N-terminal domain of MCM proteins.	Domain
F [auth 7]	PF00493	MCM P-loop domain (MCM)	MCM P-loop domain		Domain
F [auth 7]	PF17855	MCM AAA-lid domain (MCM_lid)	MCM AAA-lid domain	This entry represents the AAA-lid domain found in MCM proteins.	Domain
F [auth 7]	PF17207	MCM OB domain (MCM_OB)	MCM OB domain	This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].	Domain
E [auth 6]	PF14551	MCM N-terminal domain (MCM_N)	MCM N-terminal domain	This family contains the N-terminal domain of MCM proteins.	Domain
E [auth 6]	PF00493	MCM P-loop domain (MCM)	MCM P-loop domain		Domain
E [auth 6]	PF17855	MCM AAA-lid domain (MCM_lid)	MCM AAA-lid domain	This entry represents the AAA-lid domain found in MCM proteins.	Domain
E [auth 6]	PF17207	MCM OB domain (MCM_OB)	MCM OB domain	This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].	Domain
D [auth 5]	PF14551	MCM N-terminal domain (MCM_N)	MCM N-terminal domain	This family contains the N-terminal domain of MCM proteins.	Domain
D [auth 5]	PF00493	MCM P-loop domain (MCM)	MCM P-loop domain		Domain
D [auth 5]	PF17855	MCM AAA-lid domain (MCM_lid)	MCM AAA-lid domain	This entry represents the AAA-lid domain found in MCM proteins.	Domain
D [auth 5]	PF17207	MCM OB domain (MCM_OB)	MCM OB domain	This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].	Domain
C [auth 4]	PF14551	MCM N-terminal domain (MCM_N)	MCM N-terminal domain	This family contains the N-terminal domain of MCM proteins.	Domain
C [auth 4]	PF00493	MCM P-loop domain (MCM)	MCM P-loop domain		Domain
C [auth 4]	PF17855	MCM AAA-lid domain (MCM_lid)	MCM AAA-lid domain	This entry represents the AAA-lid domain found in MCM proteins.	Domain
C [auth 4]	PF21128	MCM4, winged helix domain (MCM4_WHD)	MCM4, winged helix domain	DNA replication licensing factor MCM4 is a component of the MCM2-MCM7 complex which consists of six sequence-related AAA+ type ATPases/helicases that form a heterohexameric ring essential for 'once per cell cycle' DNA replication initiation and elong ...	DNA replication licensing factor MCM4 is a component of the MCM2-MCM7 complex which consists of six sequence-related AAA+ type ATPases/helicases that form a heterohexameric ring essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells [1-3]. This is the winged helix domain (WHD) found at the C-terminal of MCM4 [1-3]. Upon ssDNA binding the MCM5-WHD moves out of the central channel and becomes disordered, the MCM6-WHD moves backward and away from the channel, and the MCM4-WHD now partially occludes the channel opening. These changes enable CMG (Cdc45, Mcm2-7, GINS, the eukaryotic replicative helicase) to encircle dsDNA, and is consistent with reports that showed the MCM2-7 matures into two fully assembled CMGs on dsDNA before origin DNA unwinding occurs [3].	Domain
C [auth 4]	PF17207	MCM OB domain (MCM_OB)	MCM OB domain	This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].	Domain
B [auth 3]	PF14551	MCM N-terminal domain (MCM_N)	MCM N-terminal domain	This family contains the N-terminal domain of MCM proteins.	Domain
B [auth 3]	PF00493	MCM P-loop domain (MCM)	MCM P-loop domain		Domain
B [auth 3]	PF17855	MCM AAA-lid domain (MCM_lid)	MCM AAA-lid domain	This entry represents the AAA-lid domain found in MCM proteins.	Domain
B [auth 3]	PF17207	MCM OB domain (MCM_OB)	MCM OB domain	This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].	Domain
R [auth Y]	PF07962	Replication Fork Protection Component Swi3 (Swi3)	Replication Fork Protection Component Swi3	-	Family
Q [auth X]	PF04821	Timeless protein (TIMELESS)	Timeless protein	-	Family
L [auth F], M [auth G], N [auth H]	PF12341	Minichromosome loss protein, Mcl1, middle region (Mcl1_mid)	Minichromosome loss protein, Mcl1, middle region	-	Repeat
L [auth F], M [auth G], N [auth H]	PF20946	DNA polymerase alpha-binding protein Ctf4, C-terminal domain (Ctf4_C)	DNA polymerase alpha-binding protein Ctf4, C-terminal domain	This domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the ...	This domain is found at the C-terminal end of DNA polymerase alpha- binding protein Ctf4 from yeast, its human orthologue AND1, and similar proteins from eukaryotes. This accessory factor for DNA replication plays a role in accurately duplicating the genome in vivo. This domain folds into a helical extension that is linked to the beta-propeller domain (Pfam:PF12341) and protrudes from one face of the disk-shaped trimer formed by the protein. It is essential for binding of dynamic partner proteins, such as Pol alpha-primase [1-4].	Domain
K [auth E]	PF02724	CDC45 (CDC45)	CDC45	-	Family
J [auth D]	PF05916	GINS complex protein helical bundle domain (Sld5)	GINS complex protein helical bundle domain	This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3) ...	This entry represents the C-terminal alpha helical bundle domain. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication [1-3]. It consists of four paralogous protein subunits (Sld5, Psf1, Psf2 and Psf3), all of which are included in this family. The GINS complex is conserved from yeast to humans, and has been shown in human to bind directly to DNA primase [4].	Domain
J [auth D]	PF16922	DNA replication complex GINS protein SLD5 C-terminus (SLD5_C)	DNA replication complex GINS protein SLD5 C-terminus	The C-terminal domain of DNA replication complex GINS protein SLD5 is important in the assembly of the GINS complex, a complex which is involved in initiation of DNA replication and progression of DNA replication forks [1].	Domain
A [auth 2]	PF14551	MCM N-terminal domain (MCM_N)	MCM N-terminal domain	This family contains the N-terminal domain of MCM proteins.	Domain
A [auth 2]	PF00493	MCM P-loop domain (MCM)	MCM P-loop domain		Domain
A [auth 2]	PF17855	MCM AAA-lid domain (MCM_lid)	MCM AAA-lid domain	This entry represents the AAA-lid domain found in MCM proteins.	Domain
A [auth 2]	PF17207	MCM OB domain (MCM_OB)	MCM OB domain	This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth C]	DNA replication complex GINS protein PSF3	-	nucleobase-containing compound metabolic process DNA-templated DNA replication DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process mitotic DNA replication DNA replication initiation cell cycle DNA replication initiation nuclear DNA replication cell cycle DNA replication nucleobase-containing compound metabolic process DNA-templated DNA replication DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process mitotic DNA replication DNA replication initiation cell cycle DNA replication initiation nuclear DNA replication cell cycle DNA replication mitotic DNA replication initiation mitotic cell cycle nuclear cell cycle DNA replication initiation mitotic cell cycle process cell cycle cell cycle process cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen GINS complex nuclear replication fork replication fork
H [auth B]	DNA replication complex GINS protein PSF2	-	cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process double-strand break repair via break-induced replication nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress recombinational repair metabolic process cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process double-strand break repair via break-induced replication nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress recombinational repair metabolic process cellular process macromolecule metabolic process double-strand break repair via homologous recombination DNA repair DNA-templated DNA replication DNA replication	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen GINS complex nuclear replication fork replication fork
G [auth A]	DNA replication complex GINS protein PSF1	-	mitotic DNA replication DNA-templated DNA replication DNA strand elongation involved in mitotic DNA replication nuclear DNA replication cell cycle DNA replication primary metabolic process DNA metabolic process DNA strand elongation involved in nuclear cell cycle DNA replication nucleic acid metabolic process mitotic cell cycle nucleobase-containing compound metabolic process DNA strand elongation DNA replication mitotic cell cycle process DNA strand elongation involved in cell cycle DNA replication mitotic DNA replication DNA-templated DNA replication DNA strand elongation involved in mitotic DNA replication nuclear DNA replication cell cycle DNA replication primary metabolic process DNA metabolic process DNA strand elongation involved in nuclear cell cycle DNA replication nucleic acid metabolic process mitotic cell cycle nucleobase-containing compound metabolic process DNA strand elongation DNA replication mitotic cell cycle process DNA strand elongation involved in cell cycle DNA replication metabolic process cellular process macromolecule metabolic process cell cycle DNA strand elongation involved in DNA replication cell cycle process cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen GINS complex nuclear replication fork replication fork
F [auth 7]	DNA replication licensing factor MCM7	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding protein-containing complex binding MCM complex binding chromatin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding protein-containing complex binding MCM complex binding chromatin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity nucleic acid conformation isomerase activity isomerase activity DNA helicase activity catalytic activity, acting on a nucleic acid single-stranded DNA helicase activity helicase activity ATP-dependent activity, acting on DNA catalytic activity, acting on DNA macromolecular conformation isomerase activity	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication nuclear DNA replication cell cycle DNA replication cell cycle cell cycle process DNA replication initiation nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication nuclear DNA replication cell cycle DNA replication cell cycle cell cycle process DNA replication initiation sexual reproduction reproductive process meiotic cell cycle meiotic cell cycle process premeiotic DNA replication pre-replicative complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis pre-replicative complex assembly involved in nuclear cell cycle DNA replication protein-containing complex organization pre-replicative complex assembly involved in cell cycle DNA replication protein-DNA complex assembly regulation of cellular process negative regulation of biological process chromatin organization negative regulation of cellular process chromatin remodeling negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression constitutive heterochromatin formation biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process silent mating-type cassette heterochromatin formation negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process regulation of metabolic process cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair DNA strand elongation DNA strand elongation involved in DNA replication subtelomeric heterochromatin formation	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen MCM core complex replication fork protection complex nuclear replication fork replication fork cytoplasm MCM complex pre-replicative complex nuclear pre-replicative complex chromosome, telomeric region chromosomal region
E [auth 6]	DNA replication licensing factor MCM6	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity nucleic acid conformation isomerase activity isomerase activity DNA helicase activity catalytic activity, acting on a nucleic acid single-stranded DNA helicase activity helicase activity ATP-dependent activity, acting on DNA catalytic activity, acting on DNA macromolecular conformation isomerase activity single-stranded DNA binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA replication initiation sexual reproduction reproductive process meiotic cell cycle nuclear DNA replication nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA replication initiation sexual reproduction reproductive process meiotic cell cycle nuclear DNA replication cell cycle DNA replication meiotic cell cycle process premeiotic DNA replication cell cycle cell cycle process pre-replicative complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis pre-replicative complex assembly involved in nuclear cell cycle DNA replication protein-containing complex organization pre-replicative complex assembly involved in cell cycle DNA replication protein-DNA complex assembly cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair mitotic DNA replication mitotic cell cycle mitotic cell cycle process DNA strand elongation DNA strand elongation involved in DNA replication	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen MCM core complex replication fork protection complex nuclear replication fork replication fork cytoplasm MCM complex pre-replicative complex nuclear pre-replicative complex
D [auth 5]	Minichromosome maintenance protein 5	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity chromatin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides	DNA-templated DNA replication nuclear DNA replication cell cycle DNA replication primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process macromolecule metabolic process cell cycle cell cycle process DNA replication initiation DNA-templated DNA replication nuclear DNA replication cell cycle DNA replication primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process macromolecule metabolic process cell cycle cell cycle process DNA replication initiation sexual reproduction reproductive process meiotic cell cycle meiotic cell cycle process premeiotic DNA replication pre-replicative complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis pre-replicative complex assembly involved in nuclear cell cycle DNA replication protein-containing complex organization pre-replicative complex assembly involved in cell cycle DNA replication protein-DNA complex assembly regulation of DNA-templated DNA replication initiation regulation of biological process regulation of cellular process biological regulation regulation of macromolecule metabolic process regulation of primary metabolic process regulation of DNA-templated DNA replication regulation of nucleobase-containing compound metabolic process regulation of metabolic process regulation of DNA replication regulation of DNA metabolic process cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair subtelomeric heterochromatin formation negative regulation of biological process chromatin organization negative regulation of cellular process chromatin remodeling negative regulation of macromolecule metabolic process regulation of biosynthetic process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression constitutive heterochromatin formation biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process transcription elongation by RNA polymerase II RNA metabolic process nucleobase-containing compound biosynthetic process RNA biosynthetic process DNA-templated transcription nucleic acid biosynthetic process DNA-templated transcription elongation transcription by RNA polymerase II	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen replication fork protection complex nuclear replication fork replication fork cytoplasm MCM complex pre-replicative complex nuclear pre-replicative complex chromosome, telomeric region chromosomal region
C [auth 4]	DNA replication licensing factor MCM4	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity ATP-dependent activity, acting on DNA DNA helicase activity catalytic activity, acting on DNA adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides single-stranded DNA binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication nuclear DNA replication cell cycle DNA replication cell cycle cell cycle process DNA replication initiation nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication nuclear DNA replication cell cycle DNA replication cell cycle cell cycle process DNA replication initiation sexual reproduction reproductive process meiotic cell cycle meiotic cell cycle process premeiotic DNA replication pre-replicative complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis pre-replicative complex assembly involved in nuclear cell cycle DNA replication protein-containing complex organization pre-replicative complex assembly involved in cell cycle DNA replication protein-DNA complex assembly cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair DNA strand elongation DNA strand elongation involved in DNA replication mitotic DNA replication cell cycle DNA replication initiation mitotic DNA replication initiation mitotic cell cycle nuclear cell cycle DNA replication initiation mitotic cell cycle process	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen MCM core complex replication fork protection complex nuclear replication fork replication fork cytoplasm MCM complex pre-replicative complex nuclear pre-replicative complex
B [auth 3]	DNA replication licensing factor MCM3	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity protein-containing complex binding MCM complex binding chromatin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides single-stranded DNA binding	nucleobase-containing compound metabolic process DNA-templated DNA replication DNA replication DNA replication initiation metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process sexual reproduction reproductive process meiotic cell cycle nuclear DNA replication nucleobase-containing compound metabolic process DNA-templated DNA replication DNA replication DNA replication initiation metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process sexual reproduction reproductive process meiotic cell cycle nuclear DNA replication cell cycle DNA replication meiotic cell cycle process premeiotic DNA replication cell cycle cell cycle process pre-replicative complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis pre-replicative complex assembly involved in nuclear cell cycle DNA replication protein-containing complex organization pre-replicative complex assembly involved in cell cycle DNA replication protein-DNA complex assembly regulation of cellular process negative regulation of biological process chromatin organization negative regulation of cellular process chromatin remodeling negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression constitutive heterochromatin formation biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process silent mating-type cassette heterochromatin formation negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process regulation of metabolic process cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair DNA strand elongation DNA strand elongation involved in DNA replication subtelomeric heterochromatin formation mitotic DNA replication cell cycle DNA replication initiation mitotic DNA replication initiation mitotic cell cycle nuclear cell cycle DNA replication initiation mitotic cell cycle process	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen replication fork protection complex nuclear replication fork replication fork cytoplasm MCM complex pre-replicative complex nuclear pre-replicative complex chromosome, telomeric region chromosomal region
R [auth Y]	Chromosome segregation in meiosis protein 3	DNA binding binding nucleic acid binding	DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process macromolecule metabolic process replication fork processing chromosome organization maintenance of DNA repeat elements cellular component organization DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process macromolecule metabolic process replication fork processing chromosome organization maintenance of DNA repeat elements cellular component organization organelle organization cellular component organization or biogenesis cellular response to stimulus response to stimulus cellular response to stress DNA damage response response to stress DNA repair regulation of cellular process regulation of cell cycle phase transition signaling negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction cell communication negative regulation of cellular process negative regulation of cell cycle phase transition signal transduction cell cycle DNA replication checkpoint signaling regulation of cell cycle cell cycle process regulation of biological process regulation of cell cycle process biological regulation DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling mitotic sister chromatid cohesion sister chromatid cohesion meiotic chromosome segregation sexual reproduction reproductive process meiotic cell cycle organelle fission meiotic cell cycle process nuclear division nuclear chromosome segregation meiotic nuclear division chromosome segregation regulation of primary metabolic process negative regulation of DNA-templated DNA replication negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process negative regulation of DNA replication negative regulation of metabolic process regulation of macromolecule metabolic process regulation of DNA-templated DNA replication replication fork arrest negative regulation of DNA metabolic process regulation of metabolic process regulation of DNA metabolic process regulation of DNA replication establishment of mitotic sister chromatid cohesion mitotic cell cycle mitotic cell cycle process establishment of sister chromatid cohesion	membrane-bounded organelle replication fork protection complex protein-containing complex intracellular anatomical structure nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear replication fork intracellular membraneless organelle nuclear chromosome chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle replication fork protection complex protein-containing complex intracellular anatomical structure nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear replication fork intracellular membraneless organelle nuclear chromosome chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle replication fork nuclear lumen cytoplasm
Q [auth X]	Topoisomerase 1-associated factor 1	DNA binding binding nucleic acid binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity replication fork processing chromosome organization maintenance of DNA repeat elements cellular component organization nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity replication fork processing chromosome organization maintenance of DNA repeat elements cellular component organization organelle organization cellular component organization or biogenesis cellular response to stimulus response to stimulus cellular response to stress DNA damage response response to stress DNA repair regulation of cellular process regulation of cell cycle phase transition signaling negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction cell communication negative regulation of cellular process negative regulation of cell cycle phase transition signal transduction cell cycle DNA replication checkpoint signaling regulation of cell cycle cell cycle process regulation of biological process regulation of cell cycle process biological regulation DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling mitotic sister chromatid cohesion sister chromatid cohesion regulation of primary metabolic process negative regulation of DNA-templated DNA replication negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process negative regulation of DNA replication negative regulation of metabolic process regulation of macromolecule metabolic process regulation of DNA-templated DNA replication replication fork arrest negative regulation of DNA metabolic process regulation of metabolic process regulation of DNA metabolic process regulation of DNA replication sexual reproduction reproductive process meiotic cell cycle	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle replication fork protection complex protein-containing complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear replication fork intracellular membraneless organelle nuclear chromosome chromosome cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle replication fork protection complex protein-containing complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear replication fork intracellular membraneless organelle nuclear chromosome chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle organelle lumen organelle membraneless organelle replication fork nuclear lumen
P [auth J]	DNA fork, lagging-strand template	-	-	-
O [auth I]	DNA fork, leading-strand template	-	-	-
L [auth F], M [auth G], N [auth H]	DNA polymerase alpha-binding protein	chromatin binding binding identical protein binding protein binding	cellular process cell cycle mitotic cell cycle protein-containing complex organization protein-DNA complex assembly cellular component organization protein-DNA complex organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular component organization or biogenesis nucleosome assembly cellular process cell cycle mitotic cell cycle protein-containing complex organization protein-DNA complex assembly cellular component organization protein-DNA complex organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular component organization or biogenesis nucleosome assembly nucleosome organization nucleobase-containing compound metabolic process DNA-templated DNA replication DNA replication DNA replication initiation metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular response to stimulus response to stimulus cellular response to stress DNA damage response response to stress DNA repair organelle organization mitotic sister chromatid cohesion chromosome organization sister chromatid cohesion cell cycle process double-strand break repair DNA recombination double-strand break repair via break-induced replication recombinational repair double-strand break repair via homologous recombination establishment of sister chromatid cohesion	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen nuclear replication fork replication fork Cul8-RING ubiquitin ligase complex cullin-RING ubiquitin ligase complex protein-containing complex ubiquitin ligase complex catalytic complex transferase complex intracellular protein-containing complex
K [auth E]	Cell division control protein 45	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding chromatin binding single-stranded DNA binding	nucleobase-containing compound metabolic process DNA-templated DNA replication DNA replication DNA replication initiation metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process mitotic DNA replication DNA replication preinitiation complex assembly nuclear DNA replication cell cycle DNA replication nucleobase-containing compound metabolic process DNA-templated DNA replication DNA replication DNA replication initiation metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process mitotic DNA replication DNA replication preinitiation complex assembly nuclear DNA replication cell cycle DNA replication mitotic cell cycle cellular component organization cellular component biogenesis protein-DNA complex organization mitotic DNA replication preinitiation complex assembly cellular component assembly protein-containing complex assembly cell cycle cellular component organization or biogenesis cell cycle process protein-containing complex organization protein-DNA complex assembly mitotic cell cycle process cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen nuclear replication fork replication fork
J [auth D]	DNA replication complex GINS protein SLD5	-	cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process double-strand break repair via break-induced replication nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress recombinational repair metabolic process cellular response to stimulus double-strand break repair response to stimulus DNA recombination primary metabolic process DNA metabolic process double-strand break repair via break-induced replication nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress recombinational repair metabolic process cellular process macromolecule metabolic process double-strand break repair via homologous recombination DNA repair DNA-templated DNA replication DNA replication	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen GINS complex nuclear replication fork replication fork
A [auth 2]	DNA replication licensing factor MCM2	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on a nucleic acid helicase activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity chromatin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides cation binding transition metal ion binding zinc ion binding metal ion binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process nucleobase-containing compound metabolic process DNA replication metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process nucleobase-containing compound metabolic process DNA replication metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication sexual reproduction reproductive process meiotic cell cycle nuclear DNA replication cell cycle DNA replication meiotic cell cycle process premeiotic DNA replication cell cycle cell cycle process pre-replicative complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis pre-replicative complex assembly involved in nuclear cell cycle DNA replication protein-containing complex organization pre-replicative complex assembly involved in cell cycle DNA replication protein-DNA complex assembly double-strand break repair DNA recombination double-strand break repair via break-induced replication recombinational repair double-strand break repair via homologous recombination DNA repair DNA strand elongation DNA strand elongation involved in DNA replication mitotic DNA replication DNA replication initiation cell cycle DNA replication initiation mitotic DNA replication initiation mitotic cell cycle nuclear cell cycle DNA replication initiation mitotic cell cycle process	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen replication fork protection complex nuclear replication fork replication fork cytoplasm MCM complex pre-replicative complex nuclear pre-replicative complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth C]	IPR055221	DNA replication complex GINS protein PSF3, N-terminal domain	Domain
I [auth C]	IPR036224	GINS, helical bundle-like domain superfamily	Homologous Superfamily
I [auth C]	IPR021151	GINS subunit, domain A	Domain
I [auth C]	IPR010492	GINS complex, subunit Psf3	Family
I [auth C]	IPR038437	GINS complex, subunit Psf3 superfamily	Homologous Superfamily
H [auth B]	IPR056784	DNA replication complex GINS protein PSF2, N-terminal domain	Domain
H [auth B]	IPR007257	DNA replication complex GINS protein Psf2	Family
H [auth B]	IPR021151	GINS subunit, domain A	Domain
H [auth B]	IPR036224	GINS, helical bundle-like domain superfamily	Homologous Superfamily
G [auth A]	IPR021151	GINS subunit, domain A	Domain
G [auth A]	IPR005339	GINS complex, subunit Psf1	Family
G [auth A]	IPR036224	GINS, helical bundle-like domain superfamily	Homologous Superfamily
G [auth A]	IPR056783	DNA replication complex GINS protein PSF1, C-terminal domain	Domain
F [auth 7]	IPR031327	Mini-chromosome maintenance protein	Family
F [auth 7]	IPR008050	DNA replication licensing factor Mcm7	Family
F [auth 7]	IPR018525	Mini-chromosome maintenance, conserved site	Conserved Site
F [auth 7]	IPR003593	AAA+ ATPase domain	Domain
F [auth 7]	IPR001208	MCM domain	Domain
F [auth 7]	IPR041562	MCM, AAA-lid domain	Domain
F [auth 7]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
F [auth 7]	IPR027925	MCM, N-terminal domain	Domain
F [auth 7]	IPR033762	MCM OB domain	Domain
F [auth 7]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
E [auth 6]	IPR008049	DNA replication licensing factor Mcm6	Family
E [auth 6]	IPR041024	Mcm6, C-terminal winged-helix domain	Domain
E [auth 6]	IPR031327	Mini-chromosome maintenance protein	Family
E [auth 6]	IPR018525	Mini-chromosome maintenance, conserved site	Conserved Site
E [auth 6]	IPR001208	MCM domain	Domain
E [auth 6]	IPR041562	MCM, AAA-lid domain	Domain
E [auth 6]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
E [auth 6]	IPR027925	MCM, N-terminal domain	Domain
E [auth 6]	IPR033762	MCM OB domain	Domain
E [auth 6]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
D [auth 5]	IPR031327	Mini-chromosome maintenance protein	Family
D [auth 5]	IPR018525	Mini-chromosome maintenance, conserved site	Conserved Site
D [auth 5]	IPR001208	MCM domain	Domain
D [auth 5]	IPR041562	MCM, AAA-lid domain	Domain
D [auth 5]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
D [auth 5]	IPR054125	MCM5, C-terminal domain	Domain
D [auth 5]	IPR027925	MCM, N-terminal domain	Domain
D [auth 5]	IPR033762	MCM OB domain	Domain
D [auth 5]	IPR008048	DNA replication licensing factor Mcm5	Family
D [auth 5]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
C [auth 4]	IPR031327	Mini-chromosome maintenance protein	Family
C [auth 4]	IPR018525	Mini-chromosome maintenance, conserved site	Conserved Site
C [auth 4]	IPR001208	MCM domain	Domain
C [auth 4]	IPR041562	MCM, AAA-lid domain	Domain
C [auth 4]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
C [auth 4]	IPR027925	MCM, N-terminal domain	Domain
C [auth 4]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
C [auth 4]	IPR008047	Mini-chromosome maintenance complex protein 4	Family
C [auth 4]	IPR033762	MCM OB domain	Domain
C [auth 4]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
B [auth 3]	IPR031327	Mini-chromosome maintenance protein	Family
B [auth 3]	IPR018525	Mini-chromosome maintenance, conserved site	Conserved Site
B [auth 3]	IPR003593	AAA+ ATPase domain	Domain
B [auth 3]	IPR001208	MCM domain	Domain
B [auth 3]	IPR041562	MCM, AAA-lid domain	Domain
B [auth 3]	IPR054007	MCM3 winged helix domain	Domain
B [auth 3]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B [auth 3]	IPR027925	MCM, N-terminal domain	Domain
B [auth 3]	IPR056575	MCM3-like, winged helix domain	Domain
B [auth 3]	IPR008046	DNA replication licensing factor Mcm3	Family
B [auth 3]	IPR033762	MCM OB domain	Domain
B [auth 3]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
R [auth Y]	IPR012923	Chromosome segregation in meiosis protein 3	Domain
R [auth Y]	IPR040038	TIPIN/Csm3/Swi3	Family
Q [auth X]	IPR044998	Timeless	Family
Q [auth X]	IPR006906	Timeless, N-terminal	Domain
L [auth F], M [auth G], N [auth H]	IPR022100	WDHD1/CFT4, second beta-propeller	Domain
L [auth F], M [auth G], N [auth H]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
L [auth F], M [auth G], N [auth H]	IPR048591	WDHD1/CFT4, helical bundle	Domain
L [auth F], M [auth G], N [auth H]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
K [auth E]	IPR003874	CDC45	Family
J [auth D]	IPR008591	GINS complex subunit Sld5	Family
J [auth D]	IPR021151	GINS subunit, domain A	Domain
J [auth D]	IPR038749	GINS complex protein Sld5, alpha-helical domain	Domain
J [auth D]	IPR031633	DNA replication complex GINS protein SLD5, C-terminal	Domain
J [auth D]	IPR036224	GINS, helical bundle-like domain superfamily	Homologous Superfamily
A [auth 2]	IPR031327	Mini-chromosome maintenance protein	Family
A [auth 2]	IPR018525	Mini-chromosome maintenance, conserved site	Conserved Site
A [auth 2]	IPR001208	MCM domain	Domain
A [auth 2]	IPR041562	MCM, AAA-lid domain	Domain
A [auth 2]	IPR008045	DNA replication licensing factor Mcm2	Family
A [auth 2]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A [auth 2]	IPR027925	MCM, N-terminal domain	Domain
A [auth 2]	IPR033762	MCM OB domain	Domain
A [auth 2]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily