6YAN | pdb_00006yan

Mammalian 48S late-stage translation initiation complex with histone 4 mRNA

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J [auth K]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8053075	3000433	SCOP2B (2022-06-29)
M [auth N]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052707	3000135	SCOP2B (2022-06-29)
M [auth N]	SCOP2B Superfamily	Ribosomal S17 N-terminal domain-like	8052708	3002138	SCOP2B (2022-06-29)
N [auth O]	SCOP2B Superfamily	L30e-like	8063980	3001739	SCOP2B (2022-06-29)
O [auth P]	SCOP2B Superfamily	Homeodomain-like	8052970	3000001	SCOP2B (2022-06-29)
O [auth P]	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8052971	3001284	SCOP2B (2022-06-29)
P [auth Q]	SCOP2B Superfamily	Translational machinery components	8097824	3000571	SCOP2B (2022-06-29)
Q [auth S]	SCOP2B Superfamily	Ribosomal protein S5 domain 2-like	8082683	3000100	SCOP2B (2022-06-29)
S [auth V]	SCOP2B Superfamily	Winged helix DNA-binding domain	8089322	3000034	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	SIS domain/Ribosomal protein S2-like	8097826	3001397	SCOP2B (2022-06-29)
T [auth W]	SCOP2B Superfamily	Ribosomal protein S10	8097814	3001336	SCOP2B (2022-06-29)
U [auth X]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8053140	3000068	SCOP2B (2022-06-29)
V [auth Y]	SCOP2B Superfamily	Ribosomal protein S8	8079081	3000709	SCOP2B (2022-06-29)
Y [auth b]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8053150	3000068	SCOP2B (2022-06-29)
AA [auth d]	SCOP2 Family	Cold shock DNA-binding domain-like	8095264	4001909	SCOP2 (2022-06-29)
AA [auth d]	SCOP2 Superfamily	Nucleic acid-binding proteins	8095265	3000135	SCOP2 (2022-06-29)
BA [auth e]	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052584	3000068	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Ribosomal S3Ae-like	8053208	3002166	SCOP2B (2022-06-29)
EA [auth h]	SCOP2B Superfamily	Winged helix DNA-binding domain	8090991	3000034	SCOP2B (2022-06-29)
FA [auth i]	SCOP2B Superfamily	Ribosomal protein S30e-like	8053455	3002190	SCOP2B (2022-06-29)
KA [auth U]	SCOP2B Superfamily	S13-like H2TH domain	8101439	3000053	SCOP2B (2022-06-29)
F [auth G]	SCOP2B Superfamily	Alpha-L RNA-binding motif	8052745	3001473	SCOP2B (2022-06-29)
F [auth G]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8052747	3000334	SCOP2B (2022-06-29)
F [auth G]	SCOP2B Superfamily	Nucleic acid-binding proteins	8052746	3000135	SCOP2B (2022-06-29)
G [auth H]	SCOP2B Superfamily	Ribosomal protein S7	8066001	3000799	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth l]	Ribosomal_L41	e6yanl1	A: extended segments	X: Ribosomal protein L41-A (From Topology)	H: Ribosomal protein L41-A (From Topology)	T: Ribosomal protein L41-A	F: Ribosomal_L41	ECOD (1.6)
J [auth K]	Ribosomal_S8e	e6yanK1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_S8e	ECOD (1.6)
K [auth L]	S4	e6yanL1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: S4	ECOD (1.6)
L [auth M]	S10_plectin	e6yanM1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: S10_plectin	ECOD (1.6)
M [auth N]	Ribosomal_S17_1	e6yanN1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S17_1	ECOD (1.6)
N [auth O]	Ribosomal_L7Ae	e6yanO1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: L30e-like (From Topology)	T: L30e-like	F: Ribosomal_L7Ae	ECOD (1.6)
O [auth P]	Ribosomal_S13_N	e6yanP2	A: alpha arrays	X: HTH	H: 40S ribosomal protein S13 N-terminal domain (From Topology)	T: 40S ribosomal protein S13 N-terminal domain	F: Ribosomal_S13_N	ECOD (1.6)
O [auth P]	Ribosomal_S15_2	e6yanP1	A: alpha arrays	X: S15/NS1 RNA-binding domain (From Topology)	H: S15/NS1 RNA-binding domain (From Topology)	T: S15/NS1 RNA-binding domain	F: Ribosomal_S15_2	ECOD (1.6)
P [auth Q]	Ribosomal_S11	e6yanQ1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_S11	ECOD (1.6)
Q [auth S]	Ribosomal_S9	e6yanS1	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S9	ECOD (1.6)
R [auth T]	Ribosomal_S17e	e6yanT1	A: alpha arrays	X: HTH	H: HTH	T: FF domain	F: Ribosomal_S17e	ECOD (1.6)
S [auth V]	Ribosomal_S19e	e6yanV1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S19e	ECOD (1.6)
B [auth C]	Ribosomal_S2_2	e6yanC1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Ribosomal protein S2/SIS domain (From Topology)	T: Ribosomal protein S2/SIS domain	F: Ribosomal_S2_2	ECOD (1.6)
T [auth W]	Ribosomal_S10_1	e6yanW1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal protein S10 (From Topology)	T: Ribosomal protein S10	F: Ribosomal_S10_1	ECOD (1.6)
U [auth X]	Ribosomal_S21e	e6yanX1	A: a+b two layers	X: 40S ribosomal protein rpS21 (S21e) (From Topology)	H: 40S ribosomal protein rpS21 (S21e) (From Topology)	T: 40S ribosomal protein rpS21 (S21e)	F: Ribosomal_S21e	ECOD (1.6)
V [auth Y]	Ribosomal_S8_N_1	e6yanY1	A: a+b two layers	X: R3H domain-like	H: Ribosomal protein S8, N-terminal domain (From Topology)	T: Ribosomal protein S8, N-terminal domain	F: Ribosomal_S8_N_1	ECOD (1.6)
V [auth Y]	Ribosomal_S8_C_1	e6yanY2	A: a+b two layers	X: Ribosomal protein S8, C-terminal domain (From Topology)	H: Ribosomal protein S8, C-terminal domain (From Topology)	T: Ribosomal protein S8, C-terminal domain	F: Ribosomal_S8_C_1	ECOD (1.6)
W [auth Z]	Ribosom_S12_S23	e6yanZ1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosom_S12_S23	ECOD (1.6)
X [auth a]	Ribosomal_S24e	e6yana1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_S24e	ECOD (1.6)
Y [auth b]	Ribosomal_S26e	e6yanb1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S26e	ECOD (1.6)
Z [auth c]	Ribosomal_S27e	e6yanc1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27e	ECOD (1.6)
AA [auth d]	Ribosomal_S28e	e6yand1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S28e	ECOD (1.6)
BA [auth e]	Ribosomal_S14_2	e6yane1	A: few secondary structure elements	X: Glucocorticoid receptor-like	H: LIM domain-like	T: LIM domain-like	F: Ribosomal_S14_2	ECOD (1.6)
CA [auth f]	Ribosomal_S27	e6yanf1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_S27	ECOD (1.6)
C [auth D]	Ribosomal_S3Ae_N	e6yanD1	A: beta barrels	X: Ribosomal protein L25-like	H: 40S ribosomal protein S3A N-terminal domain (From Topology)	T: 40S ribosomal protein S3A N-terminal domain	F: Ribosomal_S3Ae_N	ECOD (1.6)
C [auth D]	Ribosomal_S3Ae_C	e6yanD2	A: a+b two layers	X: T-fold	H: 40S ribosomal protein S3A C-terminal domain (From Topology)	T: 40S ribosomal protein S3A C-terminal domain	F: Ribosomal_S3Ae_C	ECOD (1.6)
DA [auth g]	DUF1899	e6yang1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 7-bladed	F: DUF1899	ECOD (1.6)
EA [auth h]	Ribosomal_S25	e6yanh1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: Ribosomal_S25	ECOD (1.6)
FA [auth i]	Ribosomal_S30	e6yani1	A: extended segments	X: 40S ribosomal protein S30 (S30e) (From Topology)	H: 40S ribosomal protein S30 (S30e) (From Topology)	T: 40S ribosomal protein S30 (S30e)	F: Ribosomal_S30	ECOD (1.6)
IA [auth A]	S1_1	e6yanA1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: S1_1	ECOD (1.6)
IA [auth A]	EIF_2_alpha_N	e6yanA3	A: alpha arrays	X: HhH/H2TH	H: eIF2alpha middle domain (From Topology)	T: eIF2alpha middle domain	F: EIF_2_alpha_N	ECOD (1.6)
IA [auth A]	EIF_2_alpha_C	e6yanA2	A: a+b two layers	X: Alpha-beta plaits	H: eIF-2-alpha, C-terminal domain (From Topology)	T: eIF-2-alpha, C-terminal domain	F: EIF_2_alpha_C	ECOD (1.6)
JA [auth B]	GTP_EFTU_D2_2	e6yanB4	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: GTP_EFTU_D2_2	ECOD (1.6)
JA [auth B]	eIF2_C	e6yanB2	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Aminomethyltransferase beta-barrel domain	F: eIF2_C	ECOD (1.6)
JA [auth B]	MnmE_helical_2nd	e6yanB1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
JA [auth B]	KOG0466	e6yanB3	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: KOG0466	ECOD (1.6)
KA [auth U]	Ribosomal_S13	e6yanU1	A: alpha arrays	X: HhH/H2TH	H: H2TH (From Topology)	T: H2TH	F: Ribosomal_S13	ECOD (1.6)
LA [auth R]	Ribosomal_S19	e6yanR1	A: a+b two layers	X: Ribosomal protein S19 (From Topology)	H: Ribosomal protein S19 (From Topology)	T: Ribosomal protein S19	F: Ribosomal_S19	ECOD (1.6)
D [auth E]	Ribosomal_S5_C_1	e6yanE3	A: a+b two layers	X: Ribosomal protein S5 domain 2-like (From Topology)	H: Ribosomal protein S5 domain 2-like (From Topology)	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S5_C_1	ECOD (1.6)
D [auth E]	Ribosomal_S5_3	e6yanE2	A: a+b two layers	X: dsRBD-like	H: dsRNA-binding domain-like (From Topology)	T: dsRNA-binding domain-like	F: Ribosomal_S5_3	ECOD (1.6)
D [auth E]	Ribosomal_S5_2	e6yanE1	A: extended segments	X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)	T: N-terminal region in 40S ribosomal protein rpS2 (S5p)	F: Ribosomal_S5_2	ECOD (1.6)
E [auth F]	Ribosomal_S3_C	e6yanF2	A: a+b two layers	X: T-fold	H: Ribosomal protein S3-C (From Topology)	T: Ribosomal protein S3-C	F: Ribosomal_S3_C	ECOD (1.6)
E [auth F]	KH_2_3	e6yanF1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: KH-domains	T: Prokaryotic type KH domain (KH-domain type II)	F: KH_2_3	ECOD (1.6)
F [auth G]	Ribosomal_S4e	e6yanG1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_S4e	ECOD (1.6)
F [auth G]	40S_S4_C	e6yanG2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: 40S_S4_C	ECOD (1.6)
F [auth G]	RS4NT	e6yanG3	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Alpha-L RNA-binding motif	F: RS4NT	ECOD (1.6)
G [auth H]	Ribosomal_S7_1	e6yanH1	A: alpha arrays	X: Ribosomal protein S7 (From Topology)	H: Ribosomal protein S7 (From Topology)	T: Ribosomal protein S7	F: Ribosomal_S7_1	ECOD (1.6)
H [auth I]	Ribosomal_S6e	e6yanI1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_S6e	ECOD (1.6)
I [auth J]	Ribosomal_S7e_N	e6yanJ2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_N	ECOD (1.6)
I [auth J]	Ribosomal_S7e_C_1	e6yanJ1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: 40S ribosomal protein S7-A (From Topology)	T: 40S ribosomal protein S7-A	F: Ribosomal_S7e_C_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J [auth K]	1.10.168.20	Mainly Alpha	Orthogonal Bundle	Phosducin	domain 2	CATH (utative)
L [auth M]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
O [auth P]	1.10.287.10	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	S15/NS1, RNA-binding	CATH (utative)
P [auth Q]	3.30.420.80	Alpha Beta	2-Layer Sandwich	Nucleotidyltransferase	domain 5	CATH (utative)
Q [auth S]	3.30.230.10	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S5	domain 2	CATH (utative)
B [auth C]	3.40.50.10490	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glucose-6-phosphate isomerase like protein	CATH (utative)
U [auth X]	3.30.1230.20	Alpha Beta	2-Layer Sandwich	Hypothetical Cytosolic Protein	Chain: A	CATH (utative)
V [auth Y]	3.30.1370.30	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
V [auth Y]	3.30.1490.10	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (utative)
X [auth a]	3.30.70.3370	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (utative)
Y [auth b]	3.30.1740.20	Alpha Beta	2-Layer Sandwich	first zn-finger domain of poly(adp-ribose) polymerase-1	Ribosomal protein S26	CATH (utative)
Z [auth c]	2.20.25.100	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	Ribosomal protein S27	CATH (utative)
BA [auth e]	4.10.830.10	Few Secondary Structures	Irregular	30s Ribosomal Protein S14	Chain N	CATH (utative)
DA [auth g]	2.130.10.10	Mainly Beta	7 Propeller	Methylamine Dehydrogenase	Chain H	CATH (utative)
EA [auth h]	1.10.10.10	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	CATH (utative)
IA [auth A]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (utative)
IA [auth A]	1.10.150.190	Mainly Alpha	Orthogonal Bundle	DNA polymerase	domain 1	CATH (utative)
JA [auth B]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
JA [auth B]	2.40.30.10	Mainly Beta	Beta Barrel	Elongation Factor Tu (Ef-tu)	domain 3	CATH (utative)
D [auth E]	3.30.160.20	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain		CATH (utative)
D [auth E]	3.30.230.10	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S5	domain 2	CATH (utative)
E [auth F]	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
J [auth K]	PF01201	Ribosomal protein S8e (Ribosomal_S8e)	Ribosomal protein S8e	-	Family
K [auth L]	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
K [auth L]	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
L [auth M]	PF03501	Plectin/S10 domain (S10_plectin)	Plectin/S10 domain	This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.	Domain
M [auth N]	PF16205	Ribosomal_S17 N-terminal (Ribosomal_S17_N)	Ribosomal_S17 N-terminal	-	Family
M [auth N]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17		Domain
N [auth O]	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...	This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].	Domain
O [auth P]	PF08069	Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)	Ribosomal S13/S15 N-terminal domain	This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].	Domain
O [auth P]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15		Domain
P [auth Q]	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
Q [auth S]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
R [auth T]	PF00833	Ribosomal S17 (Ribosomal_S17e)	Ribosomal S17	-	Family
S [auth V]	PF01090	Ribosomal protein S19e (Ribosomal_S19e)	Ribosomal protein S19e	-	Family
B [auth C]	PF01667	Ribosomal protein S27 (Ribosomal_S27e)	Ribosomal protein S27	-	Family
B [auth C]	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
T [auth W]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
U [auth X]	PF01249	Ribosomal protein S21e (Ribosomal_S21e)	Ribosomal protein S21e	-	Family
V [auth Y]	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8		Domain
W [auth Z]	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	This protein is known as S12 in bacteria and archaea and S23 in eukaryotes.	Domain
C [auth D]	PF01015	Ribosomal S3Ae family (Ribosomal_S3Ae)	Ribosomal S3Ae family	-	Family
IA [auth A]	PF01282	Ribosomal protein S24e (Ribosomal_S24e)	Ribosomal protein S24e	-	Family
IA [auth A]	PF07541	Eukaryotic translation initiation factor 2 alpha subunit (EIF_2_alpha)	Eukaryotic translation initiation factor 2 alpha subunit	-	Family
IA [auth A]	PF00575	S1 RNA binding domain (S1)	S1 RNA binding domain	The S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure.	Domain
JA [auth B]	PF00009	Elongation factor Tu GTP binding domain (GTP_EFTU)	Elongation factor Tu GTP binding domain	This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.	Domain
JA [auth B]	PF03144	Elongation factor Tu domain 2 (GTP_EFTU_D2)	Elongation factor Tu domain 2	Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...	Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.	Domain
JA [auth B]	PF09173	Initiation factor eIF2 gamma, C terminal (eIF2_C)	Initiation factor eIF2 gamma, C terminal	Members of this family, which are found in the initiation factors eIF2 and EF-Tu, adopt a structure consisting of a beta barrel with Greek key topology. They are required for formation of the ternary complex with GTP and initiator tRNA [1].	Domain
KA [auth U]	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
LA [auth R]	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19		Domain
E [auth F]	PF07650	KH domain (KH_2)	KH domain		Domain
E [auth F]	PF00240	Ubiquitin family (ubiquitin)	Ubiquitin family	This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...	This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].	Domain
E [auth F]	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
E [auth F]	PF01599	Ribosomal protein S27a (Ribosomal_S27)	Ribosomal protein S27a	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...	This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].	Domain
F [auth G]	PF00900	Ribosomal family S4e (Ribosomal_S4e)	Ribosomal family S4e	-	Family
F [auth G]	PF16121	40S ribosomal protein S4 C-terminus (40S_S4_C)	40S ribosomal protein S4 C-terminus	-	Family
F [auth G]	PF08071	RS4NT (NUC023) domain (RS4NT)	RS4NT (NUC023) domain	This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].	Domain
F [auth G]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
F [auth G]	PF00467	KOW motif (KOW)	KOW motif	-	Family
G [auth H]	PF03297	S25 ribosomal protein (Ribosomal_S25)	S25 ribosomal protein	-	Family
G [auth H]	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
H [auth I]	PF04758	Ribosomal protein S30 (Ribosomal_S30)	Ribosomal protein S30	-	Family
H [auth I]	PF01092	Ribosomal protein S6e (Ribosomal_S6e)	Ribosomal protein S6e	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth l]	60s ribosomal protein l41	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
J [auth K]	40S ribosomal protein S8	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
K [auth L]	Ribosomal protein S9 (Predicted)	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex
L [auth M]	40S ribosomal protein eS10	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
M [auth N]	Ribosomal protein S11	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
N [auth O]	40S ribosomal protein S12	structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway positive regulation of biological process regulation of signal transduction cell communication positive regulation of response to stimulus positive regulation of Wnt signaling pathway signal transduction Wnt signaling pathway positive regulation of cellular process positive regulation of canonical Wnt signaling pathway regulation of biological process regulation of signaling cell surface receptor signaling pathway regulation of Wnt signaling pathway biological regulation regulation of response to stimulus regulation of cell communication positive regulation of signaling biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol Golgi apparatus endomembrane system preribosome protein-containing complex ribonucleoprotein complex small-subunit processome cytosolic small ribosomal subunit small ribosomal subunit ribosomal subunit
O [auth P]	ribosomal protein uS15	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
P [auth Q]	40S ribosomal protein uS11	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex ribosome cytoplasm
Q [auth S]	ribosomal protein uS9	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process maturation of SSU-rRNA cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular component biogenesis nucleobase-containing compound metabolic process RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process maturation of SSU-rRNA cellular component organization or biogenesis RNA processing rRNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process ribosomal small subunit biogenesis nucleic acid metabolic process biosynthetic process cellular process metabolic process macromolecule metabolic process protein metabolic process translation	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
R [auth T]	ribosomal protein eS17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
S [auth V]	40S ribosomal protein eS19	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
B [auth C]	40S ribosomal protein SA	protein binding binding virus receptor activity exogenous protein binding structural molecule activity structural constituent of ribosome extracellular matrix binding laminin binding cell adhesion molecule binding laminin receptor activity cell adhesion mediator activity	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cell periphery cellular anatomical structure plasma membrane membrane cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex cell periphery cellular anatomical structure plasma membrane membrane cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol membrane-bounded organelle nucleus intracellular membrane-bounded organelle
T [auth W]	Ribosomal_S10 domain-containing protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytosolic ribosome cytoplasm cytosol
U [auth X]	40S ribosomal protein S21	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	intracellular organelle cellular anatomical structure intracellular anatomical structure cytosolic ribosome organelle membraneless organelle intracellular membraneless organelle ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex rough endoplasmic reticulum membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytosolic ribosome organelle membraneless organelle intracellular membraneless organelle ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex rough endoplasmic reticulum membrane-bounded organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system
V [auth Y]	Ribosomal protein S15a	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
W [auth Z]	40S ribosomal protein uS12	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex ribosome cytosolic ribosome cytoplasm cytosol rough endoplasmic reticulum endoplasmic reticulum endomembrane system
X [auth a]	40S ribosomal protein S24	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol ribosomal subunit protein-containing complex ribonucleoprotein complex
Y [auth b]	40S ribosomal protein eS26	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol rough endoplasmic reticulum membrane-bounded organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system
Z [auth c]	40S ribosomal protein S27	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process metabolic process macromolecule metabolic process RNA processing rRNA metabolic process protein metabolic process translation	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol preribosome protein-containing complex ribonucleoprotein complex small-subunit processome postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse cell junction asymmetric synapse cytosolic small ribosomal subunit small ribosomal subunit ribosomal subunit
AA [auth d]	ribosomal protein eS28	structural molecule activity structural constituent of ribosome	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis ribosome assembly RNA metabolic process rRNA processing nucleobase-containing compound biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process maturation of SSU-rRNA RNA processing rRNA metabolic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol preribosome protein-containing complex ribonucleoprotein complex small-subunit processome synapse cell junction cytosolic small ribosomal subunit small ribosomal subunit ribosomal subunit rough endoplasmic reticulum endoplasmic reticulum endomembrane system
BA [auth e]	ribosomal protein uS14	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol rough endoplasmic reticulum membrane-bounded organelle endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system
CA [auth f]	ribosomal protein eS31	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol protein-containing complex ribonucleoprotein complex
C [auth D]	ribosomal protein eS1	structural molecule activity structural constituent of ribosome	developmental process cellular developmental process cell differentiation cellular process biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
DA [auth g]	ribosomal protein RACK1	translation regulator activity ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding	rhythmic process developmental process multicellular organism development multicellular organismal process anatomical structure morphogenesis embryonic morphogenesis anatomical structure development embryo development gastrulation cellular process apoptotic process cell death programmed cell death	somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body intracellular anatomical structure perinuclear region of cytoplasm cytoplasm cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection phagocytic cup somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body intracellular anatomical structure perinuclear region of cytoplasm cytoplasm cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection phagocytic cup cell periphery plasma membrane membrane protein-containing complex ribonucleoprotein complex intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome membrane-bounded organelle nucleus intracellular membrane-bounded organelle
EA [auth h]	ribosomal protein eS25	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization or biogenesis RNA processing rRNA metabolic process ribosomal small subunit biogenesis	postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse postsynaptic specialization organelle synapse cell junction asymmetric synapse membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse postsynaptic specialization organelle synapse cell junction asymmetric synapse membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen membraneless organelle nuclear lumen cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit cytosolic ribosome ribonucleoprotein complex ribosome cytoplasm cytosol
FA [auth i]	40S ribosomal protein eS30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol membrane-bounded organelle nucleus intracellular membrane-bounded organelle
GA [auth 2]	18S ribosomal RNA	-	-	-
HA [auth 3]	histone 4 (H4) mRNA	-	-	-
IA [auth A]	Eukaryotic translation initiation factor 2 subunit 1	translation factor activity translation initiation factor activity ribonucleoprotein complex binding protein-containing complex binding binding ribosome binding RNA binding nucleic acid binding	-	intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule protein-containing complex eukaryotic translation initiation factor 2 complex ribonucleoprotein complex intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule protein-containing complex eukaryotic translation initiation factor 2 complex ribonucleoprotein complex eukaryotic 48S preinitiation complex cytosolic translation preinitiation complex
JA [auth B]	eukaryotic translation initiation factor 2 subunit gamma	translation factor activity translation initiation factor activity RNA binding binding tRNA binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding translation factor activity translation initiation factor activity RNA binding binding tRNA binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	ribonucleoprotein complex biogenesis protein-containing complex organization primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation ribonucleoprotein complex biogenesis protein-containing complex organization primary metabolic process translation gene expression macromolecule biosynthetic process protein-RNA complex assembly cellular component organization cellular component biogenesis protein-RNA complex organization cellular component assembly biosynthetic process protein-containing complex assembly cytoplasmic translation cellular process cytoplasmic translational initiation metabolic process translational initiation cellular component organization or biogenesis protein metabolic process macromolecule metabolic process formation of translation preinitiation complex	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex eukaryotic translation initiation factor 2 complex
KA [auth U]	40S ribosomal protein uS13	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytosolic ribosome cytoplasm cytosol
LA [auth R]	Ribosomal protein S15	enzyme regulator activity molecular function inhibitor activity ubiquitin-protein transferase regulator activity ubiquitin-protein transferase inhibitor activity ubiquitin ligase inhibitor activity molecular function regulator activity enzyme inhibitor activity protein binding binding MDM2/MDM4 family protein binding RNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction regulation of signal transduction by p53 class mediator positive regulation of signal transduction by p53 class mediator cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction regulation of signal transduction by p53 class mediator positive regulation of signal transduction by p53 class mediator signal transduction positive regulation of cellular process regulation of biological process regulation of signaling biological regulation positive regulation of intracellular signal transduction signal transduction by p53 class mediator regulation of response to stimulus regulation of cell communication cellular process positive regulation of signaling establishment of organelle localization cellular localization ribonucleoprotein complex biogenesis nucleocytoplasmic transport transport nuclear transport ribosomal subunit export from nucleus intracellular transport establishment of localization cellular component biogenesis localization ribosome biogenesis ribosomal small subunit export from nucleus organelle localization establishment of localization in cell cellular component organization or biogenesis nuclear export ribosome localization RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process biosynthetic process metabolic process macromolecule metabolic process RNA processing rRNA metabolic process organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribosome assembly protein metabolic process translation	intracellular organelle cellular anatomical structure intracellular anatomical structure cytosolic ribosome organelle membraneless organelle intracellular membraneless organelle ribosome cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit intracellular organelle cellular anatomical structure intracellular anatomical structure cytosolic ribosome organelle membraneless organelle intracellular membraneless organelle ribosome cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex
MA [auth 1]	initiator methionylated tRNA	-	-	-
D [auth E]	40S ribosomal protein uS5	-	-	-
E [auth F]	Ribosomal protein S3	DNA binding binding nucleic acid binding DNA-(apurinic or apyrimidinic site) endonuclease activity endonuclease activity catalytic activity, acting on a nucleic acid DNA nuclease activity DNA endonuclease activity catalytic activity, acting on DNA nuclease activity class I DNA-(apurinic or apyrimidinic site) endonuclease activity lyase activity catalytic activity carbon-oxygen lyase activity DNA binding binding nucleic acid binding DNA-(apurinic or apyrimidinic site) endonuclease activity endonuclease activity catalytic activity, acting on a nucleic acid DNA nuclease activity DNA endonuclease activity catalytic activity, acting on DNA nuclease activity class I DNA-(apurinic or apyrimidinic site) endonuclease activity lyase activity catalytic activity carbon-oxygen lyase activity RNA binding structural molecule activity structural constituent of ribosome	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction regulation of programmed cell death positive regulation of apoptotic signaling pathway cell communication positive regulation of response to stimulus signal transduction positive regulation of cellular process cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction regulation of programmed cell death positive regulation of apoptotic signaling pathway cell communication positive regulation of response to stimulus signal transduction positive regulation of cellular process regulation of biological process regulation of signaling positive regulation of programmed cell death regulation of apoptotic process biological regulation cell death positive regulation of apoptotic process apoptotic signaling pathway regulation of response to stimulus regulation of cell communication cellular process apoptotic process programmed cell death positive regulation of signaling regulation of apoptotic signaling pathway primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process DNA repair cell division regulation of biosynthetic process regulation of protein metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process protein metabolic process regulation of metabolic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membraneless organelle nuclear lumen cytosolic ribosome ribosome cytosol cytoskeleton spindle microtubule cytoskeleton cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex
F [auth G]	40S ribosomal protein S4	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytosolic ribosome ribosome cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex
G [auth H]	Ribosomal protein S5	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen protein-containing complex small ribosomal subunit ribosomal subunit ribonucleoprotein complex ribosome cytosolic ribosome cytoplasm cytosol
H [auth I]	40S ribosomal protein S6	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
I [auth J]	ribosomal protein eS7	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization or biogenesis RNA processing rRNA metabolic process ribosomal small subunit biogenesis protein metabolic process translation	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen 90S preribosome preribosome protein-containing complex ribonucleoprotein complex cytosolic small ribosomal subunit small ribosomal subunit ribosomal subunit cytosolic ribosome ribosome cytoplasm cytosol small-subunit processome centrosome microtubule organizing center cytoskeleton microtubule cytoskeleton

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth l]	IPR007836	Large ribosomal subunit protein eS32	Family
J [auth K]	IPR001047	Small ribosomal subunit protein eS8	Family
J [auth K]	IPR042563	Small ribosomal subunit protein eS8 subdomain, eukaryotes	Homologous Superfamily
J [auth K]	IPR022309	Ribosomal protein eS8/ribosomal biogenesis NSA2	Family
J [auth K]	IPR018283	Small ribosomal subunit protein eS8, conserved site	Conserved Site
K [auth L]	IPR002942	RNA-binding S4 domain	Domain
K [auth L]	IPR022801	Small ribosomal subunit protein uS4	Family
K [auth L]	IPR018079	Small ribosomal subunit protein uS4, conserved site	Conserved Site
K [auth L]	IPR001912	Small ribosomal subunit protein uS4, N-terminal	Domain
K [auth L]	IPR005710	Small ribosomal subunit protein uS4, eukaryotic/archaeal	Family
K [auth L]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
L [auth M]	IPR037447	Small ribosomal subunit protein eS10	Family
L [auth M]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
L [auth M]	IPR005326	Plectin/eS10, N-terminal	Domain
M [auth N]	IPR019979	Small ribosomal subunit protein uS17, conserved site	Conserved Site
M [auth N]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
M [auth N]	IPR000266	Small ribosomal subunit protein uS17	Family
M [auth N]	IPR032440	Small ribosomal subunit protein uS17, N-terminal	Domain
M [auth N]	IPR028333	Small ribosomal subunit protein uS17, archaeal/eukaryotic	Family
N [auth O]	IPR000530	Small ribosomal subunit protein eS12	Family
N [auth O]	IPR004038	Ribosomal protein eL8/eL30/eS12/Gadd45	Domain
N [auth O]	IPR047860	Small ribosomal subunit protein eS12, conserved site	Conserved Site
N [auth O]	IPR029064	Ribosomal protein eL30-like superfamily	Homologous Superfamily
O [auth P]	IPR012606	Small ribosomal subunit protein uS15, N-terminal	Domain
O [auth P]	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
O [auth P]	IPR023029	Small ribosomal subunit protein uS15, archaea/eukaryotes	Family
O [auth P]	IPR000589	Small ribosomal subunit protein uS15	Family
P [auth Q]	IPR001971	Small ribosomal subunit protein uS11	Family
P [auth Q]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
P [auth Q]	IPR018102	Small ribosomal subunit protein uS11, conserved site	Conserved Site
Q [auth S]	IPR020574	Small ribosomal subunit protein uS9, conserved site	Conserved Site
Q [auth S]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
Q [auth S]	IPR000754	Small ribosomal subunit protein uS9	Family
Q [auth S]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
R [auth T]	IPR036401	Small ribosomal subunit protein eS17 superfamily	Homologous Superfamily
R [auth T]	IPR001210	Small ribosomal subunit protein eS17	Family
R [auth T]	IPR018273	Small ribosomal subunit protein eS17, conserved site	Conserved Site
S [auth V]	IPR001266	Small ribosomal subunit protein eS19	Family
S [auth V]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
S [auth V]	IPR018277	Small ribosomal subunit protein eS19, conserved site	Conserved Site
S [auth V]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
B [auth C]	IPR032281	Small ribosomal subunit protein uS2, C-terminal domain	Domain
B [auth C]	IPR027504	Small ribosomal subunit protein uS2, vertebrates	Family
B [auth C]	IPR005707	Small ribosomal subunit protein uS2, eukaryotic/archaeal	Family
B [auth C]	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
B [auth C]	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
B [auth C]	IPR001865	Small ribosomal subunit protein uS2	Family
B [auth C]	IPR027498	Small ribosomal subunit protein uS2, eukaryotic	Family
T [auth W]	IPR001848	Small ribosomal subunit protein uS10	Family
T [auth W]	IPR027486	Small ribosomal subunit protein uS10 domain	Domain
T [auth W]	IPR036838	Small ribosomal subunit protein uS10 domain superfamily	Homologous Superfamily
T [auth W]	IPR005729	Small ribosomal subunit protein uS10, eukaryotic/archaeal	Family
T [auth W]	IPR018268	Small ribosomal subunit protein uS10, conserved site	Conserved Site
U [auth X]	IPR038579	Small ribosomal subunit protein eS21 superfamily	Homologous Superfamily
U [auth X]	IPR018279	Small ribosomal subunit protein eS21, conserved site	Conserved Site
U [auth X]	IPR001931	Small ribosomal subunit protein eS21	Family
V [auth Y]	IPR000630	Small ribosomal subunit protein uS8	Family
V [auth Y]	IPR047863	Small ribosomal subunit protein uS8, conserved site	Conserved Site
V [auth Y]	IPR035987	Small ribosomal subunit protein uS8 superfamily	Homologous Superfamily
W [auth Z]	IPR006032	Small ribosomal subunit protein uS12	Family
W [auth Z]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
W [auth Z]	IPR005680	Small ribosomal subunit protein uS12, eukaryotic/archaeal	Family
X [auth a]	IPR053709	Eukaryotic Ribosomal Protein eS24	Homologous Superfamily
X [auth a]	IPR001976	Small ribosomal subunit protein eS24	Family
X [auth a]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
X [auth a]	IPR018098	Small ribosomal subunit protein eS24 conserved site	Conserved Site
Y [auth b]	IPR038551	Ribosomal protein eS26 superfamily	Homologous Superfamily
Y [auth b]	IPR000892	Small ribosomal subunit protein eS26	Family
Y [auth b]	IPR047864	Ribosomal protein eS26, conserved site	Conserved Site
Z [auth c]	IPR023407	Small ribosomal subunit protein eS27, zinc-binding domain superfamily	Homologous Superfamily
Z [auth c]	IPR000592	Small ribosomal subunit protein eS27	Family
Z [auth c]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
AA [auth d]	IPR028626	Ribosomal protein eS28 conserved site	Conserved Site
AA [auth d]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
AA [auth d]	IPR000289	Small ribosomal subunit protein eS28	Family
BA [auth e]	IPR001209	Small ribosomal subunit protein uS14	Family
BA [auth e]	IPR018271	Small ribosomal subunit protein uS14, conserved site	Conserved Site
BA [auth e]	IPR039744	Small ribosomal subunit protein uS14, eukaryotes/archaea	Family
BA [auth e]	IPR043140	Small ribosomal subunit protein uS14 superfamily	Homologous Superfamily
CA [auth f]	IPR019954	Ubiquitin conserved site	Conserved Site
CA [auth f]	IPR000626	Ubiquitin-like domain	Domain
CA [auth f]	IPR038582	Small ribosomal subunit protein eS31 eukaryotic-type superfamily	Homologous Superfamily
CA [auth f]	IPR002906	Small ribosomal subunit protein eS31	Domain
CA [auth f]	IPR019956	Ubiquitin domain	Domain
CA [auth f]	IPR050158	Ubiquitin and ubiquitin-like	Family
CA [auth f]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
CA [auth f]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
C [auth D]	IPR001593	Small ribosomal subunit protein eS1	Family
C [auth D]	IPR018281	Small ribosomal subunit protein eS1, conserved site	Conserved Site
C [auth D]	IPR027500	Small ribosomal subunit protein eS1, eukaryotes	Family
DA [auth g]	IPR019775	WD40 repeat, conserved site	Conserved Site
DA [auth g]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
DA [auth g]	IPR045223	Small ribosomal subunit protein RACK1-like	Family
DA [auth g]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
DA [auth g]	IPR001680	WD40 repeat	Repeat
DA [auth g]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
EA [auth h]	IPR004977	Small ribosomal subunit protein eS25	Family
EA [auth h]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
FA [auth i]	IPR039415	Ubiquitin-like protein FUBI	Domain
FA [auth i]	IPR019956	Ubiquitin domain	Domain
FA [auth i]	IPR019954	Ubiquitin conserved site	Conserved Site
FA [auth i]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
FA [auth i]	IPR000626	Ubiquitin-like domain	Domain
FA [auth i]	IPR006846	Small ribosomal subunit protein eS30	Family
IA [auth A]	IPR003029	S1 domain	Domain
IA [auth A]	IPR044126	IF2a, S1-like domain	Domain
IA [auth A]	IPR024054	Translation initiation factor 2, alpha subunit, middle domain superfamily	Homologous Superfamily
IA [auth A]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
IA [auth A]	IPR024055	Translation initiation factor 2, alpha subunit, C-terminal	Homologous Superfamily
IA [auth A]	IPR011488	Translation initiation factor 2, alpha subunit	Family
JA [auth B]	IPR000795	Translational (tr)-type GTP-binding domain	Domain
JA [auth B]	IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Homologous Superfamily
JA [auth B]	IPR004161	Translation elongation factor EFTu-like, domain 2	Domain
JA [auth B]	IPR050543	Eukaryotic Initiation Factor 2 Gamma Subunit	Family
JA [auth B]	IPR044128	Initiation factor eIF2 gamma, GTP-binding domain	Domain
JA [auth B]	IPR015256	Initiation factor eIF2 gamma, C-terminal	Domain
JA [auth B]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
JA [auth B]	IPR044127	Initiation factor eIF2 gamma, domain 2	Domain
JA [auth B]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
KA [auth U]	IPR027437	Small ribosomal subunit protein uS13, C-terminal	Homologous Superfamily
KA [auth U]	IPR001892	Small ribosomal subunit protein uS13	Family
KA [auth U]	IPR018269	Small ribosomal subunit protein uS13, conserved site	Conserved Site
KA [auth U]	IPR010979	Small ribosomal subunit protein uS13-like, H2TH	Homologous Superfamily
LA [auth R]	IPR023575	Small ribosomal subunit protein uS19, superfamily	Homologous Superfamily
LA [auth R]	IPR020934	Small ribosomal subunit protein uS19, conserved site	Conserved Site
LA [auth R]	IPR005713	Small ribosomal subunit protein uS19, eukaryotic/archaeal	Family
LA [auth R]	IPR002222	Small ribosomal subunit protein uS19	Family
E [auth F]	IPR001351	Small ribosomal subunit protein uS3, C-terminal	Domain
E [auth F]	IPR009019	K homology domain superfamily, prokaryotic type	Homologous Superfamily
E [auth F]	IPR004044	K Homology domain, type 2	Domain
E [auth F]	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
E [auth F]	IPR036419	Ribosomal protein S3, C-terminal domain superfamily	Homologous Superfamily
E [auth F]	IPR005703	Small ribosomal subunit protein uS3, eukaryotic/archaeal	Family
E [auth F]	IPR018280	Small ribosomal subunit protein uS3, conserved site	Conserved Site
F [auth G]	IPR018199	Small ribosomal subunit protein eS4, N-terminal, conserved site	Conserved Site
F [auth G]	IPR013843	Small ribosomal subunit protein eS4, N-terminal	Domain
F [auth G]	IPR032277	Small ribosomal subunit protein eS4, C-terminal domain	Domain
F [auth G]	IPR002942	RNA-binding S4 domain	Domain
F [auth G]	IPR013845	Small ribosomal subunit protein eS4, central region	Domain
F [auth G]	IPR000876	Small ribosomal subunit protein eS4	Family
F [auth G]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
F [auth G]	IPR038237	Small ribosomal subunit protein eS4, central domain superfamily	Homologous Superfamily
F [auth G]	IPR041982	Small ribosomal subunit protein eS4, KOW domain	Domain
F [auth G]	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
F [auth G]	IPR005824	KOW	Domain
G [auth H]	IPR020606	Small ribosomal subunit protein uS7, conserved site	Conserved Site
G [auth H]	IPR000235	Small ribosomal subunit protein uS7	Family
G [auth H]	IPR036823	Small ribosomal subunit protein uS7 domain superfamily	Homologous Superfamily
G [auth H]	IPR023798	Small ribosomal subunit protein uS7 domain	Domain
G [auth H]	IPR005716	Ribosomal protein uS7, eukaryotic/archaeal	Family
H [auth I]	IPR014401	Small ribosomal subunit protein eS6-like	Family
H [auth I]	IPR001377	Small ribosomal subunit protein eS6	Family
H [auth I]	IPR018282	Small ribosomal subunit protein eS6, conserved site	Conserved Site
I [auth J]	IPR000554	Small ribosomal subunit protein eS7	Family
I [auth J]	IPR047861	Small ribosomal subunit protein eS7, conserved site	Conserved Site