6RH5 | pdb_00006rh5

Solution structure and 1H, 13C and 15N chemical shift assignments for NECAP1 PHear domain

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6rh5a1	All beta proteins	PH domain-like barrel	PH domain-like	Necap1 N-terminal domain-like	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d6rh5a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Necap1 N-terminal domain-like	8093761	4001928	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PH domain-like	8093762	3000134	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF1681	e6rh5A1	A: beta barrels	X: PH domain-like	H: PH domain-like (From Topology)	T: PH domain-like	F: DUF1681	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07933	Protein of unknown function (DUF1681) (DUF1681)	Protein of unknown function (DUF1681)	This family is composed of sequences derived from a number of hypothetical eukaryotic proteins of unknown function.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Adaptin ear-binding coat-associated protein 1	-	localization transport cellular process establishment of localization vesicle-mediated transport import into cell cellular localization presynaptic endocytosis vesicle-mediated transport in synapse establishment of localization in cell endocytosis establishment of protein localization nitrogen compound transport protein transport localization transport cellular process establishment of localization vesicle-mediated transport import into cell cellular localization presynaptic endocytosis vesicle-mediated transport in synapse establishment of localization in cell endocytosis establishment of protein localization nitrogen compound transport protein transport macromolecule localization intracellular protein localization	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane clathrin-coated pit endomembrane system presynapse synapse cell junction membrane-bounded organelle protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane clathrin-coated pit endomembrane system presynapse synapse cell junction membrane-bounded organelle protein-containing complex vesicle coat intracellular vesicle membrane protein complex membrane coat intracellular organelle bounding membrane of organelle vesicle membrane cytoplasmic vesicle clathrin-coated vesicle clathrin vesicle coat coated vesicle vesicle clathrin-coated vesicle membrane coated membrane intracellular membrane-bounded organelle clathrin coat coated vesicle membrane cytoplasmic vesicle membrane organelle organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR012466	NECAP, PHear domain	Domain
A	IPR011993	PH-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q8NC96	developmental and epileptic encephalopathy, 21 acute myeloid leukemia developmental and epileptic encephalopathy Epileptic encephalopathy lung carcinoma medulloblastoma pilocytic astrocytoma astrocytic tumor glioblastoma malignant ependymoma ovarian cancer subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor epilepsy large cell medulloblastoma developmental and epileptic encephalopathy, 21 acute myeloid leukemia developmental and epileptic encephalopathy Epileptic encephalopathy lung carcinoma medulloblastoma pilocytic astrocytoma astrocytic tumor glioblastoma malignant ependymoma ovarian cancer subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor epilepsy large cell medulloblastoma malignant glioma Pick disease

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.