6RH5 | pdb_00006rh5

Solution structure and 1H, 13C and 15N chemical shift assignments for NECAP1 PHear domain

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 600
2	2D 1H-13C HSQC aliphatic	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 600
3	2D 1H-13C HSQC aromatic	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 600
4	2D 1H-13C HSQC aliphatic (constant time)	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 600
5	2D 1H-13C HSQC aromatic (constant time)	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 600
14	3D HNCA	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 600
13	3D CBCA(CO)NH	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 600
12	3D HNCACB	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 600
11	3D HBHA(CO)NH	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE 600
10	3D HCCH-COSY (1H,13C,1H)	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE 600
9	3D HCCH-TOCSY (13C,13C,1H)	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE 600
8	3D 1H-15N NOESY tau(m) 150ms	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 800
7	3D 1H-13C NOESY aliphatic tau(m) 150ms	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 800
6	3D 1H-13C NOESY aromatic tau(m) 150ms	0.5 mM [U-98% 13C; U-98% 15N] NECAP1 1-133, 70 mM [U-2H] sodium acetate	95% H2O/5% D2O	70 mM	7.0	1 atm	298	Bruker AVANCE III 800

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	600
2	Bruker	AVANCE	600
3	Bruker	AVANCE III	800

NMR Refinement
Method	Details	Software
torsion angle dynamics		UNIO
simulated annealing		Xplor-NIH
molecular dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	50
Conformers Submitted Total Number	30
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	TopSpin	3.5	Bruker Biospin
2	chemical shift assignment	CcpNmr Analysis	2.4.2	CCPN
3	chemical shift assignment	Sparky	3.115	Goddard
4	structure calculation	UNIO	2.8.1	Herrmann
5	structure calculation	Xplor-NIH	2.28	Schwieters, Kuszewski, Tjandra and Clore
6	structure calculation	Amber	11	Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.