Crystal structure of the epidermal growth factor receptor extracellular region with R84K mutation in complex with epiregulin crystallized with trehalose
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | EGF/Laminin-like | 8036173 | 3000412 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | EGF/Laminin-like | 8036173 | 3000412 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | EGF_1 | e7lenD1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: EGF_1 | ECOD (1.6) |
| C | EGF_1 | e7lenC1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: EGF_1 | ECOD (1.6) |
| B | Recep_L_domain | e7lenB1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
| B | GF_recep_IV,Recep_L_domain | e7lenB2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: GF_recep_IV,Recep_L_domain | ECOD (1.6) |
| B | Furin-like | e7lenB3 | A: few secondary structure elements | X: EGF-like | H: Growth factor receptor domain (From Topology) | T: Growth factor receptor domain | F: Furin-like | ECOD (1.6) |
| A | Recep_L_domain | e7lenA1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
| A | GF_recep_IV,Recep_L_domain | e7lenA2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: GF_recep_IV,Recep_L_domain | ECOD (1.6) |
| A | Furin-like | e7lenA3 | A: few secondary structure elements | X: EGF-like | H: Growth factor receptor domain (From Topology) | T: Growth factor receptor domain | F: Furin-like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.80.20.20 | Alpha Beta | Alpha-Beta Horseshoe | 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a' | Chain A | CATH (utative) |
| B | 2.10.220.10 | Mainly Beta | Ribbon | Hormone Receptor, Insulin-like Growth Factor Receptor 1 | Chain A domain 2 | CATH (utative) |
| A | 2.10.220.10 | Mainly Beta | Ribbon | Hormone Receptor, Insulin-like Growth Factor Receptor 1 | Chain A domain 2 | CATH (utative) |
| A | 3.80.20.20 | Alpha Beta | Alpha-Beta Horseshoe | 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a' | Chain A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00757 | Furin-like cysteine rich region (Furin-like) | Furin-like cysteine rich region | Domain | ||
| PF01030 | Receptor L domain (Recep_L_domain) | Receptor L domain | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000742 | EGF-like domain | Domain | |
| IPR016245 | Tyrosine protein kinase, EGF/ERB/XmrK receptor | Family | |
| IPR020635 | Tyrosine-protein kinase, catalytic domain | Domain | |
| IPR000719 | Protein kinase domain | Domain | |
| IPR032778 | Growth factor receptor domain 4 | Domain | |
| IPR006212 | Furin-like repeat | Repeat | |
| IPR017441 | Protein kinase, ATP binding site | Binding Site | |
| IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain | Domain | |
| IPR009030 | Growth factor receptor cysteine-rich domain superfamily | Homologous Superfamily | |
| IPR008266 | Tyrosine-protein kinase, active site | Active Site | |
| IPR036941 | Receptor L-domain superfamily | Homologous Superfamily | |
| IPR049328 | Epidermal growth factor receptor-like, transmembrane-juxtamembrane segment | Domain | |
| IPR000494 | Receptor L-domain | Domain | |
| IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
| IPR006211 | Furin-like cysteine-rich domain | Domain | |
| IPR050122 | Receptor Tyrosine Kinase | Family |














