7OKB | pdb_00007okb

Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 45

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Z	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
U	SCOP2 Family	UDP N-acetylglucosamine acyltransferase-like	8105346	4002830	SCOP2 (2022-06-29)
U	SCOP2 Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2 (2022-06-29)
T	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
O [auth L]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
N [auth K]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
M [auth J]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
L [auth O]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
K [auth N]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
J [auth M]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
DA [auth d]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
CA [auth c]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
BA [auth b]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8105347	3001804	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z	Hexapep_2_1	e7okbZ1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
Y	Hexapep_2_1	e7okbY1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
X	Hexapep_2_1	e7okbX1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
W	Hexapep_2_1	e7okbW1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
V	Hexapep_2_1	e7okbV1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
U	Hexapep_2_1	e7okbU1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
T	Hexapep_2_1	e7okbT1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
S	Hexapep_2_1	e7okbS1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
R	Hexapep_2_1	e7okbR1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
Q	Hexapep_2_1	e7okbQ1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
P	Hexapep_2_1	e7okbP1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
O [auth L]	Hexapep_2_1	e7okbL1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
N [auth K]	Hexapep_2_1	e7okbK1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
M [auth J]	Hexapep_2_1	e7okbJ1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
L [auth O]	Hexapep_2_1	e7okbO1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
K [auth N]	Hexapep_2_1	e7okbN1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
J [auth M]	Hexapep_2_1	e7okbM1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
I	Hexapep_2_1	e7okbI1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
H	Hexapep_2_1	e7okbH1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
G	Hexapep_2_1	e7okbG1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
F	Hexapep_2_1	e7okbF1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
E	Hexapep_2_1	e7okbE1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
DA [auth d]	Hexapep_2_1	e7okbd1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
D	Hexapep_2_1	e7okbD1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
CA [auth c]	Hexapep_2_1	e7okbc1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
C	Hexapep_2_1	e7okbC1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
BA [auth b]	Hexapep_2_1	e7okbb1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
B	Hexapep_2_1	e7okbB1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
AA [auth a]	Hexapep_2_1	e7okba1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)
A	Hexapep_2_1	e7okbA1	A: beta duplicates or obligate multimers	X: Single-stranded left-handed beta-helix	H: Trimeric LpxA-like enzymes (From Topology)	T: Trimeric LpxA-like enzymes	F: Hexapep_2_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	PF00132	Bacterial transferase hexapeptide (six repeats) (Hexapep)	Bacterial transferase hexapeptide (six repeats)	-	Repeat
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2 (Acetyltransf_11)	Udp N-acetylglucosamine O-acyltransferase; Domain 2	This is domain 2, or the C-terminal domain, of Udp N-acetylglucosamine O-acyltransferase. This enzyme is a zinc-dependent enzyme that catalyses the deacetylation of UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine to form UDP-3-O-(R-hydroxymyris ...	This is domain 2, or the C-terminal domain, of Udp N-acetylglucosamine O-acyltransferase. This enzyme is a zinc-dependent enzyme that catalyses the deacetylation of UDP-3-O-((R)-3-hydroxymyristoyl)-N-acetylglucosamine to form UDP-3-O-(R-hydroxymyristoyl)glucosamine and acetate.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity O-acyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity	glycolipid metabolic process lipid A biosynthetic process carbohydrate derivative metabolic process lipid biosynthetic process phospholipid metabolic process phosphate-containing compound metabolic process lipooligosaccharide biosynthetic process phosphorus metabolic process membrane lipid metabolic process carbohydrate derivative biosynthetic process lipooligosaccharide metabolic process liposaccharide metabolic process primary metabolic process glycolipid biosynthetic process glycolipid metabolic process lipid A biosynthetic process carbohydrate derivative metabolic process lipid biosynthetic process phospholipid metabolic process phosphate-containing compound metabolic process lipooligosaccharide biosynthetic process phosphorus metabolic process membrane lipid metabolic process carbohydrate derivative biosynthetic process lipooligosaccharide metabolic process liposaccharide metabolic process primary metabolic process glycolipid biosynthetic process phospholipid biosynthetic process lipid A metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process metabolic process cellular process membrane lipid biosynthetic process lipid metabolic process	cellular anatomical structure membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR029098	UDP N-acetylglucosamine O-acyltransferase, C-terminal	Domain
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR010137	Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	Family
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR018357	Hexapeptide transferase, conserved site	Conserved Site
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR037157	UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily	Homologous Superfamily
A, AA [auth a], B, BA [auth b], C, A, AA [auth a], B, BA [auth b], C, CA [auth c], D, DA [auth d], E, F, G, H, I, J [auth M], K [auth N], L [auth O], M [auth J], N [auth K], O [auth L], P, Q, R, S, T, U, V, W, X, Y, Z	IPR001451	Hexapeptide repeat	Repeat