7P6Z | pdb_00007p6z

Mycoplasma pneumoniae 70S ribosome in untreated cells


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
IA [auth C]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8107598 3001473 SCOP2B (2022-06-29)
OA [auth L]SCOP2B SuperfamilyS13-like H2TH domain 8107648 3000053 SCOP2B (2022-06-29)
I [auth m]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8107666 3000995 SCOP2B (2022-06-29)
H [auth i]SCOP2B SuperfamilyRibosomal protein L13 8107608 3001134 SCOP2B (2022-06-29)
G [auth k]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8107650 3001045 SCOP2B (2022-06-29)
E [auth c]SCOP2B SuperfamilyRibosomal protein L4 8107624 3001146 SCOP2B (2022-06-29)
VA [auth P]SCOP2B SuperfamilyNucleic acid-binding proteins 8107664 3000135 SCOP2B (2022-06-29)
SA [auth G]SCOP2B SuperfamilyRibosomal protein S8 8107654 3000709 SCOP2B (2022-06-29)
QA [auth R]SCOP2B SuperfamilyRibosomal protein S19 8107622 3000686 SCOP2B (2022-06-29)
PA [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8107606 3001284 SCOP2B (2022-06-29)
NA [auth I]SCOP2B SuperfamilyRibosomal protein S10 8107628 3001336 SCOP2B (2022-06-29)
MA [auth M]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8107656 3000068 SCOP2B (2022-06-29)
LA [auth K]SCOP2B SuperfamilyNucleic acid-binding proteins 8107620 3000135 SCOP2B (2022-06-29)
HA [auth J]SCOP2B SuperfamilyTranslational machinery components 8107646 3000571 SCOP2B (2022-06-29)
GA [auth H]SCOP2 FamilyTranslational machinery components 8107609 4000951 SCOP2 (2022-06-29)
GA [auth H]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8107610 3000100 SCOP2 (2022-06-29)
EA [auth F]SCOP2B SuperfamilyRibosomal protein S7 8107618 3000799 SCOP2B (2022-06-29)
AA [auth t]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8107660 3000334 SCOP2B (2022-06-29)
Z [auth n]SCOP2B SuperfamilyTranslational machinery components 8107652 3000571 SCOP2B (2022-06-29)
Y [auth j]SCOP2B Superfamily50S Ribosomal protein L14-like 8107662 3000433 SCOP2B (2022-06-29)
X [auth p]SCOP2B SuperfamilyRibosomal protein L20 8107632 3000563 SCOP2B (2022-06-29)
W [auth l]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8107596 3000884 SCOP2B (2022-06-29)
V [auth b]SCOP2B SuperfamilyTranslational proteins 8107626 3000811 SCOP2B (2022-06-29)
U [auth d]SCOP2 FamilyRibosomal protein L5 8107657 4001498 SCOP2 (2022-06-29)
U [auth d]SCOP2 SuperfamilyRL5-like 8107658 3001709 SCOP2 (2022-06-29)
T [auth z]SCOP2B SuperfamilyZn-binding ribosomal proteins 8107630 3001320 SCOP2B (2022-06-29)
P [auth o]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8107604 3000334 SCOP2B (2022-06-29)
O [auth 1]SCOP2B SuperfamilyL35p-like 8107614 3000790 SCOP2B (2022-06-29)
N [auth 2]SCOP2B SuperfamilyRibosomal protein L36 8107602 3001346 SCOP2B (2022-06-29)
L [auth y]SCOP2 FamilyRibosomal protein L32p 8107611 4000508 SCOP2 (2022-06-29)
L [auth y]SCOP2 SuperfamilyZn-binding ribosomal proteins 8107612 3001320 SCOP2 (2022-06-29)
K [auth u]SCOP2 FamilyRibosomal L27 protein 8107615 4001900 SCOP2 (2022-06-29)
K [auth u]SCOP2 SuperfamilyRibosomal L27 protein-like 8107616 3000539 SCOP2 (2022-06-29)
J [auth q]SCOP2 FamilyRibosomal protein l21p 8107633 4001630 SCOP2 (2022-06-29)
J [auth q]SCOP2 Superfamilyl21p-like 8107634 3002005 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IA [auth C]S4e7p6zC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
OA [auth L]Ribosomal_S13_1e7p6zL1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
RA [auth T]F_UNCLASSIFIEDe7p6zT1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: F_UNCLASSIFIEDECOD (1.6)
I [auth m]Ribosomal_L17_1e7p6zm1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
H [auth i]Ribosomal_L13e7p6zi1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
G [auth k]Ribosomal_L27Ae7p6zk1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
F [auth e]Ribosomal_L6e7p6ze1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
F [auth e]Ribosomal_L6_1e7p6ze2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
CB [auth g]Ribosomal_L10e7p6zg1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
BB [auth h]Ribosomal_L11e7p6zh1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
BB [auth h]Ribosomal_L11_Ne7p6zh2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
AB [auth f]Ribosomal_L9_Ne7p6zf1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
AB [auth f]Ribosomal_L9_Ce7p6zf2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
E [auth c]Ribosomal_L4e7p6zc1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
VA [auth P]Ribosomal_S17_1e7p6zP1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
TA [auth Q]Ribosomal_S18e7p6zQ1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
SA [auth G]Ribosomal_S8_Ne7p6zG2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
SA [auth G]Ribosomal_S8_Ce7p6zG1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
QA [auth R]Ribosomal_S19e7p6zR1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
PA [auth N]Ribosomal_S15_1e7p6zN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
NA [auth I]Ribosomal_S10e7p6zI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
D [auth a]Ribosomal_L2_1e7p6za1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth a]Ribosomal_L2_Ce7p6za2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
MA [auth M]Ribosomal_S14e7p6zM1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
LA [auth K]Ribosom_S12_S23e7p6zK1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
KA [auth O]Ribosomal_S16_1e7p6zO1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
JA [auth S]Ribosomal_S20pe7p6zS1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
HA [auth J]Ribosomal_S11e7p6zJ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
GA [auth H]Ribosomal_S9e7p6zH1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
FA [auth A]Ribosomal_S2e7p6zA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
EA [auth F]Ribosomal_S7_1e7p6zF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
DA [auth D]Ribosomal_S5_Ce7p6zD2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
DA [auth D]Ribosomal_S5e7p6zD1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
CA [auth B]Ribosomal_S3_Ce7p6zB1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
CA [auth B]KH_2_1e7p6zB2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
AA [auth t]ribosomal_L24_1e7p6zt1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
Z [auth n]Ribosomal_L18pe7p6zn1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
Y [auth j]Ribosomal_L14e7p6zj1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
X [auth p]Ribosomal_L20e7p6zp1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
W [auth l]Ribosomal_L16e7p6zl1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
V [auth b]Ribosomal_L3e7p6zb1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
U [auth d]Ribosomal_L5_Ce7p6zd1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
T [auth z]Ribosomal_L33e7p6zz1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
S [auth x]Ribosomal_L31e7p6zx1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
R [auth v]Ribosomal_L28e7p6zv1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
Q [auth s]Ribosomal_L23_2e7p6zs1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
P [auth o]Ribosomal_L19e7p6zo1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
O [auth 1]Ribosomal_L35pe7p6z11 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
N [auth 2]Ribosomal_L36e7p6z21 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
M [auth 0]Ribosomal_L34e7p6z01 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
L [auth y]Ribosomal_L32pe7p6zy1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
K [auth u]Ribosomal_L27e7p6zu1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
J [auth q]Ribosomal_L21pe7p6zq1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
IA [auth C]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
IA [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
IA [auth C]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
OA [auth L]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
RA [auth T]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
RA [auth T]PF00467KOW motif (KOW)KOW motif- Family
XA [auth Z]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
ZA [auth Y]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
VA [auth P]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
VA [auth P]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
UA [auth E]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
UA [auth E]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
TA [auth Q]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
TA [auth Q]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
SA [auth G]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
QA [auth R]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
QA [auth R]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
PA [auth N]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
PA [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
NA [auth I]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
NA [auth I]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
MA [auth M]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
MA [auth M]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
LA [auth K]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
LA [auth K]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
KA [auth O]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
KA [auth O]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
JA [auth S]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
HA [auth J]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
HA [auth J]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
GA [auth H]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
GA [auth H]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
GA [auth H]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
FA [auth A]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
FA [auth A]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
FA [auth A]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
EA [auth F]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
EA [auth F]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
DA [auth D]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
DA [auth D]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
DA [auth D]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
DA [auth D]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
CA [auth B]PF07650KH domain (KH_2)KH domainDomain
CA [auth B]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
CA [auth B]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
O [auth 1]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
N [auth 2]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
M [auth 0]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
IA [auth C]30S ribosomal protein S4
OA [auth L]30S ribosomal protein S13
RA [auth T]30S ribosomal protein S21
XA [auth Z]nascent peptide---
YA [auth 7]tRNA-Phe---
I [auth m]50S ribosomal protein L17
H [auth i]50S ribosomal protein L13
G [auth k]50S ribosomal protein L15
F [auth e]50S ribosomal protein L6
CB [auth g]50S ribosomal protein L10
BB [auth h]50S ribosomal protein L11
AB [auth f]50S ribosomal protein L9
ZA [auth Y]mRNA---
E [auth c]50S ribosomal protein L4
WA [auth 5]16S ribosomal RNA---
VA [auth P]30S ribosomal protein S17
UA [auth E]30S ribosomal protein S6
TA [auth Q]30S ribosomal protein S18
SA [auth G]30S ribosomal protein S8
QA [auth R]30S ribosomal protein S19
PA [auth N]30S ribosomal protein S15
NA [auth I]30S ribosomal protein S10
D [auth a]50S ribosomal protein L2
MA [auth M]30S ribosomal protein S14 type Z
LA [auth K]30S ribosomal protein S12
KA [auth O]30S ribosomal protein S16
JA [auth S]30S ribosomal protein S20
HA [auth J]30S ribosomal protein S11
GA [auth H]30S ribosomal protein S9
FA [auth A]30S ribosomal protein S2
EA [auth F]30S ribosomal protein S7
DA [auth D]30S ribosomal protein S5
C [auth w]50S ribosomal protein L29
CA [auth B]30S ribosomal protein S3
BA [auth r]50S ribosomal protein L22
AA [auth t]50S ribosomal protein L24
Z [auth n]50S ribosomal protein L18
Y [auth j]50S ribosomal protein L14
X [auth p]50S ribosomal protein L20
W [auth l]50S ribosomal protein L16
V [auth b]50S ribosomal protein L3
U [auth d]50S ribosomal protein L5
T [auth z]50S ribosomal protein L33 1
B [auth 4]5S ribosomal RNA---
S [auth x]50S ribosomal protein L31
R [auth v]50S ribosomal protein L28
Q [auth s]50S ribosomal protein L23
P [auth o]50S ribosomal protein L19
O [auth 1]50S ribosomal protein L35
N [auth 2]50S ribosomal protein L36
M [auth 0]50S ribosomal protein L34
L [auth y]50S ribosomal protein L32
K [auth u]50S ribosomal protein L27
J [auth q]50S ribosomal protein L21
A [auth 3]23S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IA [auth C]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
IA [auth C]IPR002942RNA-binding S4 domainDomain
IA [auth C]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
IA [auth C]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IA [auth C]IPR022801Small ribosomal subunit protein uS4Family
IA [auth C]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
OA [auth L]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
OA [auth L]IPR001892Small ribosomal subunit protein uS13Family
OA [auth L]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
OA [auth L]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
OA [auth L]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
RA [auth T]IPR001911Small ribosomal subunit protein bS21Family
I [auth m]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
I [auth m]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
I [auth m]IPR000456Large ribosomal subunit protein bL17Family
H [auth i]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
H [auth i]IPR005822Large ribosomal subunit protein uL13Family
H [auth i]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
H [auth i]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
G [auth k]IPR021131Large ribosomal subunit protein uL15/eL18Domain
G [auth k]IPR030878Large ribosomal subunit protein uL15Family
G [auth k]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
G [auth k]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
F [auth e]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
F [auth e]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
F [auth e]IPR000702Large ribosomal subunit protein uL6-likeFamily
F [auth e]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
F [auth e]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
CB [auth g]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
CB [auth g]IPR001790Large ribosomal subunit protein uL10Family
CB [auth g]IPR022973Large ribosomal subunit protein uL10, bacteriaFamily
CB [auth g]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
CB [auth g]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
BB [auth h]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
BB [auth h]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
BB [auth h]IPR000911Ribosomal protein uL11Family
BB [auth h]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
BB [auth h]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
BB [auth h]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
BB [auth h]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
AB [auth f]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
AB [auth f]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
AB [auth f]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
AB [auth f]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
AB [auth f]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
AB [auth f]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
AB [auth f]IPR000244Large ribosomal subunit protein bL9Family
E [auth c]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth c]IPR002136Large ribosomal subunit protein uL4Family
E [auth c]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
VA [auth P]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
VA [auth P]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
VA [auth P]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VA [auth P]IPR000266Small ribosomal subunit protein uS17Family
UA [auth E]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
UA [auth E]IPR000529Small ribosomal subunit protein bS6Family
UA [auth E]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
UA [auth E]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
UA [auth E]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
TA [auth Q]IPR001648Small ribosomal subunit protein bS18Family
TA [auth Q]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
TA [auth Q]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
SA [auth G]IPR000630Small ribosomal subunit protein uS8Family
SA [auth G]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
SA [auth G]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
QA [auth R]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
QA [auth R]IPR002222Small ribosomal subunit protein uS19Family
QA [auth R]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
QA [auth R]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
PA [auth N]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
PA [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
PA [auth N]IPR000589Small ribosomal subunit protein uS15Family
NA [auth I]IPR001848Small ribosomal subunit protein uS10Family
NA [auth I]IPR027486Small ribosomal subunit protein uS10 domainDomain
NA [auth I]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
NA [auth I]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
D [auth a]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
D [auth a]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth a]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth a]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth a]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth a]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth a]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth a]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth a]IPR002171Large ribosomal subunit protein uL2Family
MA [auth M]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
MA [auth M]IPR001209Small ribosomal subunit protein uS14Family
MA [auth M]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
MA [auth M]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
LA [auth K]IPR006032Small ribosomal subunit protein uS12Family
LA [auth K]IPR005679Ribosomal protein uS12, bacteriaFamily
LA [auth K]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KA [auth O]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
KA [auth O]IPR000307Small ribosomal subunit protein bS16Family
JA [auth S]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
JA [auth S]IPR002583Small ribosomal subunit protein bS20Family
HA [auth J]IPR001971Small ribosomal subunit protein uS11Family
HA [auth J]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
HA [auth J]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
HA [auth J]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
GA [auth H]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
GA [auth H]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
GA [auth H]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
GA [auth H]IPR000754Small ribosomal subunit protein uS9Family
GA [auth H]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FA [auth A]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
FA [auth A]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
FA [auth A]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
FA [auth A]IPR001865Small ribosomal subunit protein uS2Family
EA [auth F]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
EA [auth F]IPR000235Small ribosomal subunit protein uS7Family
EA [auth F]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
EA [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
EA [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain
DA [auth D]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
DA [auth D]IPR000851Small ribosomal subunit protein uS5Family
DA [auth D]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
DA [auth D]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
DA [auth D]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
DA [auth D]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
DA [auth D]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
C [auth w]IPR050063Universal ribosomal protein uL29Family
C [auth w]IPR001854Large ribosomal subunit protein uL29Family
C [auth w]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
C [auth w]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
CA [auth B]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
CA [auth B]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
CA [auth B]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
CA [auth B]IPR004087K Homology domainDomain
CA [auth B]IPR004044K Homology domain, type 2Domain
CA [auth B]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
CA [auth B]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
CA [auth B]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
BA [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
BA [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
BA [auth r]IPR001063Large ribosomal subunit protein uL22Family
BA [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
BA [auth r]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
AA [auth t]IPR003256Large ribosomal subunit protein uL24Family
AA [auth t]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth t]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth t]IPR005824KOWDomain
AA [auth t]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth t]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Z [auth n]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
Z [auth n]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
Y [auth j]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Y [auth j]IPR000218Large ribosomal subunit protein uL14Family
Y [auth j]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
Y [auth j]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
X [auth p]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
X [auth p]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
X [auth p]IPR005813Large ribosomal subunit protein bL20Family
W [auth l]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
W [auth l]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
W [auth l]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
W [auth l]IPR016180Large ribosomal subunit protein uL16 domainDomain
W [auth l]IPR047873Large ribosomal subunit protein uL16Family
V [auth b]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
V [auth b]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
V [auth b]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
V [auth b]IPR000597Large ribosomal subunit protein uL3Family
U [auth d]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
U [auth d]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
U [auth d]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
U [auth d]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
U [auth d]IPR002132Large ribosomal subunit protein uL5Family
U [auth d]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
T [auth z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
T [auth z]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
T [auth z]IPR001705Large ribosomal subunit protein bL33Family
T [auth z]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
S [auth x]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
S [auth x]IPR027491Large ribosomal subunit protein bL31 type AFamily
S [auth x]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
S [auth x]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
R [auth v]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
R [auth v]IPR050096Bacterial ribosomal protein bL28Family
R [auth v]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
R [auth v]IPR026569Large ribosomal subunit protein bL28Family
R [auth v]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Q [auth s]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth s]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Q [auth s]IPR013025Large ribosomal subunit protein uL23-likeFamily
P [auth o]IPR001857Large ribosomal subunit protein bL19Family
P [auth o]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth o]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
P [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth 1]IPR021137Large ribosomal subunit protein bL35-likeFamily
O [auth 1]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
O [auth 1]IPR001706Large ribosomal subunit protein bL35Family
O [auth 1]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
N [auth 2]IPR000473Large ribosomal subunit protein bL36Family
N [auth 2]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
M [auth 0]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
M [auth 0]IPR000271Large ribosomal subunit protein bL34Family
L [auth y]IPR002677Large ribosomal subunit protein bL32Family
L [auth y]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
L [auth y]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
K [auth u]IPR001684Large ribosomal subunit protein bL27Family
K [auth u]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
J [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
J [auth q]IPR001787Large ribosomal subunit protein bL21Family
J [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
J [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site