Crystal structure of apo HPV16 E6
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | E6 C-terminal domain-like | 8034000 | 3001867 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | E6 C-terminal domain-like | 8034000 | 3001867 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | E6 C-terminal domain-like | 8034000 | 3001867 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8058187 | 3000083 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | E6 C-terminal domain-like | 8034000 | 3001867 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | F_UNCLASSIFIED | e7uajD3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: F_UNCLASSIFIED | ECOD (1.6) |
| D | F_UNCLASSIFIED | e7uajD4 | A: few secondary structure elements | X: E6 C-terminal domain-like (From Topology) | H: E6 C-terminal domain-like (From Topology) | T: E6 C-terminal domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
| C | F_UNCLASSIFIED | e7uajC2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: F_UNCLASSIFIED | ECOD (1.6) |
| C | F_UNCLASSIFIED | e7uajC1 | A: few secondary structure elements | X: E6 C-terminal domain-like (From Topology) | H: E6 C-terminal domain-like (From Topology) | T: E6 C-terminal domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
| B | F_UNCLASSIFIED | e7uajB3 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: F_UNCLASSIFIED | ECOD (1.6) |
| B | F_UNCLASSIFIED | e7uajB1 | A: few secondary structure elements | X: E6 C-terminal domain-like (From Topology) | H: E6 C-terminal domain-like (From Topology) | T: E6 C-terminal domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
| A | F_UNCLASSIFIED | e7uajA4 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: F_UNCLASSIFIED | ECOD (1.6) |
| A | F_UNCLASSIFIED | e7uajA2 | A: few secondary structure elements | X: E6 C-terminal domain-like (From Topology) | H: E6 C-terminal domain-like (From Topology) | T: E6 C-terminal domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 3.30.240.40 | Alpha Beta | 2-Layer Sandwich | CRO Repressor | E6 early regulatory protein | CATH (utative) |
| C | 3.30.240.40 | Alpha Beta | 2-Layer Sandwich | CRO Repressor | E6 early regulatory protein | CATH (utative) |
| B | 3.30.240.40 | Alpha Beta | 2-Layer Sandwich | CRO Repressor | E6 early regulatory protein | CATH (utative) |
| A | 3.30.240.40 | Alpha Beta | 2-Layer Sandwich | CRO Repressor | E6 early regulatory protein | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038575 | E6 superfamily | Homologous Superfamily | |
| IPR001334 | E6 early regulatory protein | Family | |
| IPR006061 | Solute-binding family 1, conserved site | Conserved Site | |
| IPR006060 | Maltose/Cyclodextrin ABC transporter, substrate-binding protein | Family | |
| IPR006059 | Bacterial-type extracellular solute-binding protein | Family |














