7ULE | pdb_00007ule

F420-1/GDP complex of F420-gamma glutamyl ligase (CofE) from Archaeoglobus fulgidus

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	CofE-like	8043883	3000257	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	F_UNCLASSIFIED	e7uleA1	A: alpha arrays	X: HTH	H: CofE insertion domain (From Topology)	T: CofE insertion domain	F: F_UNCLASSIFIED	ECOD (1.6)
A	F_UNCLASSIFIED	e7uleA2	A: a+b three layers	X: CofE-like (From Topology)	H: CofE-like (From Topology)	T: CofE-like	F: F_UNCLASSIFIED	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01996	F420-0:Gamma-glutamyl ligase (F420_ligase)	F420-0:Gamma-glutamyl ligase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Coenzyme F420:L-glutamate ligase	acid-amino acid ligase activity coenzyme F420-0 gamma-glutamyl ligase activity coenzyme F420-1:gamma-L-glutamate ligase activity catalytic activity ligase activity, forming carbon-nitrogen bonds ligase activity coenzyme F420-0:L-glutamate ligase activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding acid-amino acid ligase activity coenzyme F420-0 gamma-glutamyl ligase activity coenzyme F420-1:gamma-L-glutamate ligase activity catalytic activity ligase activity, forming carbon-nitrogen bonds ligase activity coenzyme F420-0:L-glutamate ligase activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding metal ion binding	oxoacid metabolic process carboxylic acid metabolic process carbohydrate derivative metabolic process organic acid metabolic process organophosphate metabolic process F420-0 metabolic process phosphate-containing compound metabolic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process alditol phosphate metabolic process phosphorus metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR002847	Coenzyme F420:L-glutamate ligase-like domain	Domain
A	IPR023659	Coenzyme F420:L-glutamate ligase, archaeal	Family
A	IPR008225	Coenzyme F420:L-glutamate ligase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.