ALTERNATIVE MODELING OF TROPOMYOSIN IN HUMAN CARDIAC THIN FILAMENT IN THE CALCIUM BOUND STATE
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A [auth C] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| A [auth C] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| B [auth D] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| B [auth D] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| C [auth E] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| C [auth E] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| D [auth F] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| D [auth F] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| E [auth G] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| E [auth G] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| F [auth H] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| F [auth H] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| G [auth I] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| G [auth I] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| H [auth J] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| H [auth J] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| I [auth K] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| I [auth K] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| J [auth L] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| J [auth L] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| K [auth M] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| K [auth M] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| L [auth N] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| L [auth N] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| M [auth O] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| M [auth O] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| N [auth P] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| N [auth P] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| O [auth Q] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| O [auth Q] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| P [auth R] | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| P [auth R] | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| Q [auth e] | SCOP2B Superfamily | Tropomyosin | 8101501 | 3001691 | SCOP2B (2022-06-29) |
| R [auth f] | SCOP2B Superfamily | Tropomyosin | 8101501 | 3001691 | SCOP2B (2022-06-29) |
| Y [auth i] | SCOP2B Superfamily | Tropomyosin | 8101501 | 3001691 | SCOP2B (2022-06-29) |
| Z [auth j] | SCOP2B Superfamily | Tropomyosin | 8101501 | 3001691 | SCOP2B (2022-06-29) |
| DA [auth d] | SCOP2B Superfamily | Troponin coil-coiled subunits | 8032250 | 3001782 | SCOP2B (2022-06-29) |
| V [auth Y] | SCOP2B Superfamily | Troponin coil-coiled subunits | 8032250 | 3001782 | SCOP2B (2022-06-29) |
| EA [auth a] | SCOP2B Superfamily | Troponin coil-coiled subunits | 8032252 | 3001782 | SCOP2B (2022-06-29) |
| W [auth V] | SCOP2B Superfamily | Troponin coil-coiled subunits | 8032252 | 3001782 | SCOP2B (2022-06-29) |
| FA [auth Z] | SCOP2B Superfamily | EF-hand | 8033359 | 3001983 | SCOP2B (2022-06-29) |
| X [auth U] | SCOP2B Superfamily | EF-hand | 8033359 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth C] | Actin_1st | e7utiC2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| A [auth C] | Actin_2nd | e7utiC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| B [auth D] | Actin_1st | e7utiD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| B [auth D] | Actin_2nd | e7utiD2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| C [auth E] | Actin_1st | e7utiE2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| C [auth E] | Actin_2nd | e7utiE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| D [auth F] | Actin_1st | e7utiF1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| D [auth F] | Actin_2nd | e7utiF2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| E [auth G] | Actin_1st | e7utiG2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| E [auth G] | Actin_2nd | e7utiG1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| F [auth H] | Actin_1st | e7utiH1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| F [auth H] | Actin_2nd | e7utiH2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| G [auth I] | Actin_1st | e7utiI1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| G [auth I] | Actin_2nd | e7utiI2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| H [auth J] | Actin_1st | e7utiJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| H [auth J] | Actin_2nd | e7utiJ2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| I [auth K] | Actin_1st | e7utiK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| I [auth K] | Actin_2nd | e7utiK2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| J [auth L] | Actin_1st | e7utiL1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| J [auth L] | Actin_2nd | e7utiL2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| K [auth M] | Actin_1st | e7utiM1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| K [auth M] | Actin_2nd | e7utiM2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| L [auth N] | Actin_1st | e7utiN2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| L [auth N] | Actin_2nd | e7utiN1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| M [auth O] | Actin_1st | e7utiO1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| M [auth O] | Actin_2nd | e7utiO2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| N [auth P] | Actin_1st | e7utiP1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| N [auth P] | Actin_2nd | e7utiP2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| O [auth Q] | Actin_1st | e7utiQ2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| O [auth Q] | Actin_2nd | e7utiQ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| P [auth R] | Actin_1st | e7utiR1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
| P [auth R] | Actin_2nd | e7utiR2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
| AA [auth g] | Tropomyosin | e7utig1 | A: alpha duplicates or obligate multimers | X: EB1 dimerisation domain-like (From Topology) | H: EB1 dimerisation domain-like (From Topology) | T: EB1 dimerisation domain-like | F: Tropomyosin | ECOD (1.6) |
| BA [auth h] | Tropomyosin | e7utih1 | A: alpha duplicates or obligate multimers | X: EB1 dimerisation domain-like (From Topology) | H: EB1 dimerisation domain-like (From Topology) | T: EB1 dimerisation domain-like | F: Tropomyosin | ECOD (1.6) |
| Q [auth e] | Tropomyosin | e7utie1 | A: alpha bundles | X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | T: Helical domain in structural maintenance of chromosomes protein 3 | F: Tropomyosin | ECOD (1.6) |
| R [auth f] | Tropomyosin | e7utif1 | A: alpha bundles | X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | T: Helical domain in structural maintenance of chromosomes protein 3 | F: Tropomyosin | ECOD (1.6) |
| S [auth W] | F_UNCLASSIFIED | e7utiW1 | A: alpha duplicates or obligate multimers | X: EB1 dimerisation domain-like (From Topology) | H: EB1 dimerisation domain-like (From Topology) | T: EB1 dimerisation domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
| T [auth b] | F_UNCLASSIFIED | e7utib1 | A: alpha duplicates or obligate multimers | X: EB1 dimerisation domain-like (From Topology) | H: EB1 dimerisation domain-like (From Topology) | T: EB1 dimerisation domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
| Y [auth i] | Tropomyosin | e7utii1 | A: alpha bundles | X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | T: Helical domain in structural maintenance of chromosomes protein 3 | F: Tropomyosin | ECOD (1.6) |
| Z [auth j] | Tropomyosin | e7utij1 | A: alpha bundles | X: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology) | T: Helical domain in structural maintenance of chromosomes protein 3 | F: Tropomyosin | ECOD (1.6) |
| EA [auth a] | F_UNCLASSIFIED | e7utia1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: F_UNCLASSIFIED | ECOD (1.6) |
| W [auth V] | F_UNCLASSIFIED | e7utiV1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: F_UNCLASSIFIED | ECOD (1.6) |
| FA [auth Z] | EF-hand_7_1 | e7utiZ2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_1 | ECOD (1.6) |
| FA [auth Z] | EF-hand_7_5 | e7utiZ1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
| X [auth U] | EF-hand_7_1 | e7utiU1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_1 | ECOD (1.6) |
| X [auth U] | EF-hand_7_5 | e7utiU2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00261 | Tropomyosin (Tropomyosin) | Tropomyosin | - | Coiled-coil | |
| PF00022 | Actin (Actin) | Actin | - | Family | |
| PF00992 | Troponin (Troponin) | Troponin | - | Family | |
| PF00261 | Tropomyosin (Tropomyosin) | Tropomyosin | - | Coiled-coil | |
| CA [auth c], DA [auth d], U [auth X], V [auth Y] | PF00992 | Troponin (Troponin) | Troponin | - | Family |
| EA [auth a], W [auth V] | PF00992 | Troponin (Troponin) | Troponin | - | Family |
| FA [auth Z], X [auth U] | PF13833 | EF-hand domain pair (EF-hand_8) | EF-hand domain pair | Domain | |
| FA [auth Z], X [auth U] | PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| HIC | Parent Component: HIS :  AA0317 :  1'-methyl-L-histidine MOD:00322 | |
| ACE | :  AA0317 , AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 :  1'-methyl-L-histidine MOD:00322 , N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 | |














