7VD6 | pdb_00007vd6

Structure of S1M1-type FCPII complex from diatom

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
K [auth 21]	Chloroa_b-bind	e7vd6211	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
J [auth 20]	Chloroa_b-bind	e7vd6201	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
I [auth 19]	Chloroa_b-bind	e7vd6191	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
G [auth 17]	Chloroa_b-bind	e7vd6171	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
F [auth 16]	Chloroa_b-bind	e7vd6161	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
B [auth 12]	Chloroa_b-bind	e7vd6121	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
H [auth 18]	Chloroa_b-bind	e7vd6181	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
E [auth 15]	Chloroa_b-bind	e7vd6151	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
D [auth 14]	Chloroa_b-bind	e7vd6141	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
C [auth 13]	Chloroa_b-bind	e7vd6131	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)
A [auth 11]	Chloroa_b-bind	e7vd6111	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: Chloroa_b-bind	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	PF00504	Chlorophyll A-B binding protein (Chloroa_b-bind)	Chlorophyll A-B binding protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
K [auth 21]	Fcpb7, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
J [auth 20]	Fcpb6, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
I [auth 19]	Fcpb5, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
G [auth 17]	Fcpb4, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
F [auth 16]	Fcpb3, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
B [auth 12]	Fcpb2, Fucoxanthin chlorophyll a/c-binding protein	-	-	-
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	Chlorophyll a/b-binding protein	chlorophyll binding binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	cellular anatomical structure membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast protein-containing complex light-harvesting complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	IPR022796	Chlorophyll A-B binding protein	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth 11], C [auth 13], D [auth 14], E [auth 15], H [auth 18]	OPM	Transmembrane	Alpha-helical polytopic	Photosystems	Light-harvesting complexes from chloroplasts

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.