Crystal structure of bovine NLRP9
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | LRR_8_4 | e7wbtA1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_4 | ECOD (1.6) |
| A | EUF07896 | e7wbtA5 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: EUF07896 | ECOD (1.6) |
| A | EUF07952 | e7wbtA3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: EUF07952 | ECOD (1.6) |
| A | F_UNCLASSIFIED | e7wbtA4 | A: alpha superhelices | X: NLRC4 helical domain HD2 (From Topology) | H: NLRC4 helical domain HD2 (From Topology) | T: NLRC4 helical domain HD2 | F: F_UNCLASSIFIED | ECOD (1.6) |
| A | NACHT | e7wbtA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: NACHT | ECOD (1.6) |
| B | LRR_8_4 | e7wbtB1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_4 | ECOD (1.6) |
| B | EUF07896 | e7wbtB5 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: EUF07896 | ECOD (1.6) |
| B | EUF07952 | e7wbtB3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: EUF07952 | ECOD (1.6) |
| B | F_UNCLASSIFIED | e7wbtB4 | A: alpha superhelices | X: NLRC4 helical domain HD2 (From Topology) | H: NLRC4 helical domain HD2 (From Topology) | T: NLRC4 helical domain HD2 | F: F_UNCLASSIFIED | ECOD (1.6) |
| B | NACHT | e7wbtB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: NACHT | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
| A | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (utative) |
| B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
| B | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF05729 | NACHT domain (NACHT) | NACHT domain | This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation [1]. This family is closely related to Pfam:PF00931. | Domain | |
| PF13516 | Leucine Rich repeat (LRR_6) | Leucine Rich repeat | - | Repeat | |
| PF17776 | NLRC4 helical domain HD2 (NLRC4_HD2) | NLRC4 helical domain HD2 | This entry represents a helical domain found in the NLRC4 protein [2] and NOD2 protein [1]. | Domain | |
| PF17779 | NOD2 winged helix domain (WHD_NOD2) | NOD2 winged helix domain | This winged helix domain is found in the NOD2 protein [1]. Its molecular function is not known. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011029 | Death-like domain superfamily | Homologous Superfamily | |
| IPR041267 | NACHT, LRR and PYD domains-containing protein, helical domain HD2 | Domain | |
| IPR001611 | Leucine-rich repeat | Repeat | |
| IPR041075 | NOD1/2, winged helix domain | Domain | |
| IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
| IPR050637 | NLRP family, innate immunity and inflammation regulators | Family | |
| IPR004020 | DAPIN domain | Domain | |
| IPR007111 | NACHT nucleoside triphosphatase | Domain | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |














