7WFE | pdb_00007wfe

Right PSI in the cyclic electron transfer supercomplex NDH-PSI from Arabidopsis


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth BA]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106954 3000850 SCOP2B (2022-06-29)
J [auth BJ]SCOP2 FamilySubunit IX of photosystem I reaction centre, PsaJ 8106959 4002101 SCOP2 (2022-06-29)
J [auth BJ]SCOP2 SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8106960 3000824 SCOP2 (2022-06-29)
L [auth BL]SCOP2 FamilyPhotosystem I reaction center subunit XI, PsaL 8107007 4002135 SCOP2 (2022-06-29)
L [auth BL]SCOP2 SuperfamilyPhotosystem I reaction center subunit XI, PsaL 8107008 3000870 SCOP2 (2022-06-29)
M [auth B1]SCOP2B SuperfamilyChlorophyll a-b binding protein 8076986 3000343 SCOP2B (2022-06-29)
N [auth B2]SCOP2B SuperfamilyChlorophyll a-b binding protein 8107014 3000343 SCOP2B (2022-06-29)
O [auth B3]SCOP2B SuperfamilyChlorophyll a-b binding protein 8107012 3000343 SCOP2B (2022-06-29)
P [auth B5]SCOP2B SuperfamilyChlorophyll a-b binding protein 8106994 3000343 SCOP2B (2022-06-29)
B [auth BB]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106956 3000850 SCOP2B (2022-06-29)
C [auth BC]SCOP2B Superfamily4Fe-4S ferredoxins 8106962 3000020 SCOP2B (2022-06-29)
D [auth BD]SCOP2 FamilyPhotosystem I subunit PsaD 8107003 4003498 SCOP2 (2022-06-29)
D [auth BD]SCOP2 SuperfamilyPhotosystem I subunit PsaD 8107004 3000951 SCOP2 (2022-06-29)
E [auth BE]SCOP2B SuperfamilyElectron transport accessory proteins 8074494 3000325 SCOP2B (2022-06-29)
F [auth BF]SCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8107006 3000813 SCOP2B (2022-06-29)
H [auth BH]SCOP2B SuperfamilyPhotosystem I reaction centre subunit VI 8107010 3002733 SCOP2B (2022-06-29)
I [auth BI]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre, PsaI 8106958 3000819 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth BA]PsaA_PsaB_Ce7wfeBA1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PsaA_PsaB_CECOD (1.6)
A [auth BA]PsaA_PsaB_Ne7wfeBA2 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PsaA_PsaB_NECOD (1.6)
J [auth BJ]PSI_PsaJe7wfeBJ1 A: extended segmentsX: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)T: Subunit IX of photosystem I reaction centre, PsaJF: PSI_PsaJECOD (1.6)
K [auth BK]PSI_PSAKe7wfeBK1 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PSI_PSAKECOD (1.6)
L [auth BL]PsaLe7wfeBL1 A: alpha bundlesX: Photosystem I reaction center subunit XI, PsaL (From Topology)H: Photosystem I reaction center subunit XI, PsaL (From Topology)T: Photosystem I reaction center subunit XI, PsaLF: PsaLECOD (1.6)
M [auth B1]Chloroa_b-binde7wfeB11 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
N [auth B2]Chloroa_b-binde7wfeB21 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
O [auth B3]Chloroa_b-binde7wfeB31 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
P [auth B5]Chloroa_b-binde7wfeB51 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
B [auth BB]PsaA_PsaB_Ce7wfeBB2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PsaA_PsaB_CECOD (1.6)
B [auth BB]PsaA_PsaB_Ne7wfeBB1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PsaA_PsaB_NECOD (1.6)
C [auth BC]Fer4_21_1e7wfeBC1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21_1ECOD (1.6)
D [auth BD]PsaDe7wfeBD1 A: a+b two layersX: Photosystem I subunit PsaD (From Topology)H: Photosystem I subunit PsaD (From Topology)T: Photosystem I subunit PsaDF: PsaDECOD (1.6)
E [auth BE]PSI_PsaEe7wfeBE1 A: beta barrelsX: SH3H: SH3T: SH3F: PSI_PsaEECOD (1.6)
F [auth BF]PSI_PsaFe7wfeBF1 A: extended segmentsX: Subunit III of photosystem I reaction centre, PsaF (From Topology)H: Subunit III of photosystem I reaction centre, PsaF (From Topology)T: Subunit III of photosystem I reaction centre, PsaFF: PSI_PsaFECOD (1.6)
G [auth BG]PSI_PSAKe7wfeBG1 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PSI_PSAKECOD (1.6)
H [auth BH]PSI_PsaHe7wfeBH1 A: extended segmentsX: Subunit VI of Photosystem I reaction centre (From Topology)H: Subunit VI of Photosystem I reaction centre (From Topology)T: Subunit VI of Photosystem I reaction centreF: PSI_PsaHECOD (1.6)
I [auth BI]PSI_8e7wfeBI1 A: extended segmentsX: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)T: Subunit VIII of photosystem I reaction centre, PsaIF: PSI_8ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth BA]PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
J [auth BJ]PF01701Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ)Photosystem I reaction centre subunit IX / PsaJ- Family
K [auth BK]PF01241Photosystem I psaG / psaK (PSI_PSAK)Photosystem I psaG / psaK- Family
L [auth BL]PF02605Photosystem I reaction centre subunit XI (PsaL)Photosystem I reaction centre subunit XI- Family
M [auth B1]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
N [auth B2]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
O [auth B3]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
P [auth B5]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
B [auth BB]PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
C [auth BC]PF146974Fe-4S dicluster domain (Fer4_21)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
D [auth BD]PF02531PsaD (PsaD)PsaD- Family
E [auth BE]PF02427Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE)Photosystem I reaction centre subunit IV / PsaEPsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1]. Domain
G [auth BG]PF01241Photosystem I psaG / psaK (PSI_PSAK)Photosystem I psaG / psaK- Family
I [auth BI]PF00796Photosystem I reaction centre subunit VIII (PSI_8)Photosystem I reaction centre subunit VIII- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth BA]Photosystem I P700 chlorophyll a apoprotein A1
J [auth BJ]Photosystem I reaction center subunit IX-
K [auth BK]Photosystem I reaction center subunit psaK, chloroplastic-
L [auth BL]Photosystem I reaction center subunit XI, chloroplastic
M [auth B1]Chlorophyll a-b binding protein 6, chloroplastic
N [auth B2]Photosystem I chlorophyll a/b-binding protein 2, chloroplastic
O [auth B3]Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic
P [auth B5]Photosystem I chlorophyll a/b-binding protein 5, chloroplastic
B [auth BB]Photosystem I P700 chlorophyll a apoprotein A2
C [auth BC]Photosystem I iron-sulfur center
D [auth BD]Photosystem I reaction center subunit II-2, chloroplastic
E [auth BE]Photosystem I reaction center subunit IV A, chloroplastic
F [auth BF]Photosystem I reaction center subunit III, chloroplastic
G [auth BG]Photosystem I reaction center subunit V, chloroplastic-
H [auth BH]Photosystem I reaction center subunit VI-2, chloroplastic-
I [auth BI]Photosystem I reaction center subunit VIII-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth BA]IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
A [auth BA]IPR001280Photosystem I PsaA/PsaBFamily
A [auth BA]IPR006243Photosystem I PsaAFamily
A [auth BA]IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
J [auth BJ]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
J [auth BJ]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
K [auth BK]IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
K [auth BK]IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
K [auth BK]IPR000549Photosystem I reaction center subunit V/PsaKFamily
K [auth BK]IPR035982Photosystem I reaction centre subunit PsaK superfamilyHomologous Superfamily
K [auth BK]IPR017493Photosystem I reaction center subunit psaK, plantFamily
L [auth BL]IPR022980Photosystem I, reaction centre subunit XIFamily
L [auth BL]IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyHomologous Superfamily
L [auth BL]IPR003757Photosystem I PsaL, reaction centre subunit XIDomain
M [auth B1]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
M [auth B1]IPR022796Chlorophyll A-B binding proteinFamily
N [auth B2]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
N [auth B2]IPR022796Chlorophyll A-B binding proteinFamily
O [auth B3]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
O [auth B3]IPR022796Chlorophyll A-B binding proteinFamily
P [auth B5]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
P [auth B5]IPR022796Chlorophyll A-B binding proteinFamily
B [auth BB]IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
B [auth BB]IPR001280Photosystem I PsaA/PsaBFamily
B [auth BB]IPR006244Photosystem I PsaBFamily
B [auth BB]IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
C [auth BC]IPR017491Photosystem I protein PsaCFamily
C [auth BC]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
C [auth BC]IPR050157Photosystem I iron-sulfur centerFamily
C [auth BC]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
D [auth BD]IPR003685Photosystem I PsaDFamily
D [auth BD]IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
E [auth BE]IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
E [auth BE]IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
F [auth BF]IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
F [auth BF]IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
G [auth BG]IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
G [auth BG]IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
G [auth BG]IPR000549Photosystem I reaction center subunit V/PsaKFamily
G [auth BG]IPR017494Photosystem I reaction center subunit VFamily
H [auth BH]IPR004928Photosystem I PsaH, reaction centre subunit VIFamily
I [auth BI]IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
I [auth BI]IPR001302Photosystem I reaction centre subunit VIIIFamily