7Y9C | pdb_00007y9c

Crystal structure of METTL9 in complex with SLC39A5 peptide and SAH

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF05219	DREV methyltransferase (DREV)	DREV methyltransferase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D	SLC39A5	monoatomic cation transmembrane transporter activity zinc ion transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transition metal ion transmembrane transporter activity metal ion transmembrane transporter activity transmembrane transporter activity monoatomic cation:bicarbonate symporter activity bicarbonate transmembrane transporter activity solute:monoatomic cation symporter activity active transmembrane transporter activity symporter activity secondary active transmembrane transporter activity	cellular response to stimulus response to nutrient levels response to stimulus response to zinc ion starvation cellular response to starvation response to metal ion starvation cellular response to nutrient levels cellular response to stress response to stress cellular process response to starvation cellular response to zinc ion starvation cellular response to BMP stimulus regulation of biological process cellular response to stimulus response to nutrient levels response to stimulus response to zinc ion starvation cellular response to starvation response to metal ion starvation cellular response to nutrient levels cellular response to stress response to stress cellular process response to starvation cellular response to zinc ion starvation cellular response to BMP stimulus regulation of biological process cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process cellular response to growth factor stimulus cell surface receptor signaling pathway signaling response to endogenous stimulus biological regulation cell communication cellular response to endogenous stimulus response to BMP transforming growth factor beta receptor superfamily signaling pathway signal transduction response to growth factor BMP signaling pathway enzyme-linked receptor protein signaling pathway import into cell transport monoatomic ion transmembrane transport import across plasma membrane zinc ion transport establishment of localization inorganic cation import across plasma membrane metal ion transport zinc ion import across plasma membrane monoatomic cation transmembrane transport transmembrane transport localization zinc ion transmembrane transport inorganic ion import across plasma membrane transition metal ion transport monoatomic ion transport monoatomic cation transport cell population proliferation neural precursor cell proliferation cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis developmental process multicellular organism development multicellular organismal process sensory organ development eye development anatomical structure development animal organ development visual system development sensory system development system development G1 to G0 transition involved in cell differentiation cellular developmental process cell differentiation cell cycle G1 to G0 transition cell cycle process regulation of mRNA splicing, via spliceosome mRNA processing positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process RNA processing positive regulation of mRNA metabolic process primary metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of mRNA processing metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process positive regulation of mRNA splicing, via spliceosome positive regulation of biological process RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of biosynthetic process positive regulation of cellular process regulation of biosynthetic process regulation of mRNA processing RNA splicing regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process regulation of RNA splicing mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process RNA splicing, via transesterification reactions positive regulation of gene expression mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of mRNA metabolic process positive regulation of RNA splicing	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle cell periphery plasma membrane membrane basal part of cell extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle cell periphery plasma membrane membrane basal part of cell basal plasma membrane plasma membrane region basolateral plasma membrane
A, B	Protein-L-histidine N-pros-methyltransferase	catalytic activity, acting on a protein protein-L-histidine N-pros-methyltransferase activity transferase activity, transferring one-carbon groups N-methyltransferase activity protein methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity	methylation metabolic process cellular process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle endoplasmic reticulum endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D	IPR003689	Zinc/iron permease	Family
C, D	IPR050799	Zinc Iron Protein (ZIP) Transporter	Family
A, B	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A, B	IPR007884	Protein-L-histidine N-pros-methyltransferase	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C, D	Pharos: Q6ZMH5	myopia 24, autosomal dominant myopia acrodermatitis enteropathica pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia ulcerative colitis Crohn disease pancreatic intraductal papillary-mucinous carcinoma psoriasis malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous neoplasm skin disease
A, B	Pharos: Q9H1A3	endogenous depression malignant glioma ovarian cancer glioblastoma medulloblastoma lung cancer osteosarcoma

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
C, D	MHS	Parent Component: HIS RESID: AA0073 PSI-MOD : 3'-methyl-L-histidine MOD:00082

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.