Quorum-sensing receptor RhlR bound to PqsE
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D [auth B] | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8036183 | 3001057 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8036183 | 3001057 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth B] | Lactamase_B_1 | e8dq0B1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_1 | ECOD (1.6) |
| C [auth A] | Lactamase_B_1 | e8dq0A1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_1 | ECOD (1.6) |
| B [auth D] | GerE | e8dq0D1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
| B [auth D] | Autoind_bind | e8dq0D2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: Autoind_bind | ECOD (1.6) |
| A [auth C] | GerE | e8dq0C2 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
| A [auth C] | Autoind_bind | e8dq0C1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: Autoind_bind | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth A], D [auth B] | PF00753 | Metallo-beta-lactamase superfamily (Lactamase_B) | Metallo-beta-lactamase superfamily | Domain | |
| A [auth C], B [auth D] | PF03472 | Autoinducer binding domain (Autoind_bind) | Autoinducer binding domain | This domain is found a a large family of transcriptional regulators. This domain specifically binds to autoinducer molecules (N-Acyl homoserine lactones, chlorolactone and rosmarinic acid) (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 20 ... | Domain |
| A [auth C], B [auth D] | PF00196 | Bacterial regulatory proteins, luxR family (GerE) | Bacterial regulatory proteins, luxR family | Domain |














