8R7L | pdb_00008r7l

Cryo-EM structure of the human TREX complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth H]SCOP2B SuperfamilyRecA-like P-loop NTPases 8040039 3002019 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth C]PF12894Anaphase-promoting complex subunit 4 WD40 domain (ANAPC4_WD40)Anaphase-promoting complex subunit 4 WD40 domain- Repeat
D [auth C]PF07676WD40-like Beta Propeller Repeat (PD40)WD40-like Beta Propeller Repeat- Repeat
D [auth C]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
C [auth B]PF16134THO complex subunit 2 N-terminus (THOC2_N)THO complex subunit 2 N-terminus- Family
C [auth B]PF11732Transcription- and export-related complex subunit (Thoc2)Transcription- and export-related complex subunit- Family
A [auth H]PF00270DEAD/DEAH box helicase (DEAD)DEAD/DEAH box helicaseMembers of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Domain
A [auth H]PF00271Helicase conserved C-terminal domain (Helicase_C)Helicase conserved C-terminal domainThe Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth D]THO complex subunit 4
D [auth C]THO complex subunit 3
C [auth B]THO complex subunit 2
B [auth A]THO complex subunit 1
A [auth H]Spliceosome RNA helicase DDX39B

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E [auth D]PharosQ86V81
C [auth B]PharosQ8NI27
B [auth A]PharosQ96FV9
A [auth H]PharosQ13838