8RKV | pdb_00008rkv

Conformational Landscape of the Type V-K CRISPR-associated TransposonIntegration Assembly CAST V-K TnsB domain local-refinement map

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth R],
H [auth S],
I [auth T],
J [auth U]		PF09299Mu transposase, C-terminal (Mu-transpos_C)Mu transposase, C-terminalMembers of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology [1]. Domain
G [auth R],
H [auth S],
I [auth T],
J [auth U]		PF13384Homeodomain-like domain (HTH_23)Homeodomain-like domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
G [auth R],
H [auth S],
I [auth T],
J [auth U]		TnsB -
F [auth 7]Target strand---
E [auth 6]Non-target strand - RE---
D [auth 5]RE---
C [auth 4]LE---
B [auth 3]Target strand - LE---
A [auth 2]Non-target strand - LE---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth R],
H [auth S],
I [auth T],
J [auth U]		IPR036397Ribonuclease H superfamilyHomologous Superfamily
G [auth R],
H [auth S],
I [auth T],
J [auth U]		IPR009057Homedomain-like superfamilyHomologous Superfamily
G [auth R],
H [auth S],
I [auth T],
J [auth U]		IPR009004Transposase, Mu, C-terminalHomologous Superfamily
G [auth R],
H [auth S],
I [auth T],
J [auth U]		IPR001584Integrase, catalytic coreDomain
G [auth R],
H [auth S],
I [auth T],
J [auth U]		IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
G [auth R],
H [auth S],
I [auth T],
J [auth U]		IPR015378Transposase-like, Mu, C-terminalDomain