8ZZA | pdb_00008zza

Integrative structure and functional anatomy of a single spoke of a nuclear pore complex


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, H
Nup84
S, T
Nup159
AB, AF, AJ, U, V
Nsp1
AA, AE, AI, W
Nic96
AC, AG, AK, Y
Nup49
AD, AH, AL, Z
Nup57
Nup157
Nup170
Nup188
Nup192
Nup53
B, I
Nup85
Nup59
Ndc1
Pom34
Pom152
Nup100
Nup116
Gle1
Nup145
Nup1
C, J
Nup120
Nup60
Mlp1
Mlp2
D, K
Nup133
E, L
Nup145c
F, M
Seh1
G, N
Sec13
O, P
Dyn2
Q, R
Nup82

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, H
IPR007252Nuclear pore protein 84/107Family
S, T
IPR039462Nucleoporin Nup159/Nup146, N-terminalDomain
S, T
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
AB, AF, AJ, U, V
IPR007758Nucleoporin, NSP1-like, C-terminalDomain
AB, AF, AJ, U, V
IPR026010Nucleoporin NSP1/NUP62Family
AA, AE, AI, W
IPR007231Nucleoporin interacting component Nup93/Nic96Family
AC, AG, AK, Y
IPR024882Nucleoporin p58/p45/NUP49Family
AC, AG, AK, Y
IPR025574Nucleoporin FG repeatRepeat
AD, AH, AL, Z
IPR025574Nucleoporin FG repeatRepeat
AD, AH, AL, Z
IPR024864Nucleoporin Nup54/Nup57/Nup44Family
AD, AH, AL, Z
IPR025712Nucleoporin Nup54, alpha-helical domainDomain
IPR042537Nucleoporin, Nup155-like, C-terminal, subdomain 2Homologous Superfamily
IPR042533Nucleoporin, Nup155-like, C-terminal, subdomain 1Homologous Superfamily
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalDomain
IPR004870Nucleoporin, Nup155-likeFamily
IPR007187Nucleoporin, Nup133/Nup155-like, C-terminalDomain
IPR042537Nucleoporin, Nup155-like, C-terminal, subdomain 2Homologous Superfamily
IPR042533Nucleoporin, Nup155-like, C-terminal, subdomain 1Homologous Superfamily
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalDomain
IPR004870Nucleoporin, Nup155-likeFamily
IPR007187Nucleoporin, Nup133/Nup155-like, C-terminalDomain
IPR044840Nucleoporin Nup188Family
IPR041634Nuclear pore protein Nup188, C-terminalDomain
IPR048883Nucleoporin Nup188, N-terminal subdomain IIIDomain
IPR018864Nucleoporin Nup188, N-terminalDomain
IPR021827Nucleoporin Nup186/Nup192/Nup205Family
IPR007846RNA-recognition motif (RRM) Nup35-type domainDomain
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IPR035979RNA-binding domain superfamilyHomologous Superfamily
B, I
IPR011502Nucleoporin Nup85-likeFamily
IPR007846RNA-recognition motif (RRM) Nup35-type domainDomain
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IPR035979RNA-binding domain superfamilyHomologous Superfamily
IPR019049Nucleoporin protein Ndc1-NupFamily
IPR012578Nuclear pore complex componentFamily
IPR056544Nucleoporin POM152, immunoglobulin-like domainDomain
IPR056540Nucleoporin POM152, N-terminal transmembrane domainDomain
IPR056542Nucleoporin POM152, first Ig-like domainDomain
IPR056543Nucleoporin POM152, ninth Ig-like domainDomain
IPR037701Nucleoporin Pom152Family
IPR056541Nucleoporin POM152, Ig-like domainDomain
IPR025574Nucleoporin FG repeatRepeat
IPR037665Nucleoporin peptidase S59-likeFamily
IPR036903Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyHomologous Superfamily
IPR007230Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainDomain
IPR025574Nucleoporin FG repeatRepeat
IPR037665Nucleoporin peptidase S59-likeFamily
IPR036903Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyHomologous Superfamily
IPR007230Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainDomain
IPR012476mRNA export factor GLE1-likeFamily
IPR038506GLE1-like superfamilyHomologous Superfamily
IPR025574Nucleoporin FG repeatRepeat
IPR037665Nucleoporin peptidase S59-likeFamily
IPR036903Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyHomologous Superfamily
IPR007230Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainDomain
IPR021967Nuclear pore complex protein NUP96, C-terminal domainDomain
C, J
IPR021717Nucleoporin Nup120/160Family
C, J
IPR055090Nucleoporin NUP120, helical domain, saccharomycetesDomain
IPR034432Nucleoporin nup60Family
IPR001611Leucine-rich repeatRepeat
IPR012929Nucleoprotein, TPR/MLP1-2 domainDomain
D, K
IPR037624Nuclear pore complex protein Nup133-likeFamily
D, K
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D, K
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalDomain
E, L
IPR025574Nucleoporin FG repeatRepeat
E, L
IPR037665Nucleoporin peptidase S59-likeFamily
E, L
IPR036903Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyHomologous Superfamily
E, L
IPR007230Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainDomain
E, L
IPR021967Nuclear pore complex protein NUP96, C-terminal domainDomain
F, M
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
F, M
IPR037363Sec13/Seh1 familyFamily
F, M
IPR001680WD40 repeatRepeat
F, M
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
G, N
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
G, N
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
G, N
IPR037363Sec13/Seh1 familyFamily
G, N
IPR001680WD40 repeatRepeat
O, P
IPR037177Dynein light chain superfamilyHomologous Superfamily
O, P
IPR001372Dynein light chain, type 1/2Family
O, P
IPR019763Dynein light chain, type 1/2, conserved siteConserved Site
Q, R
IPR037700Nucleoporin NUP88/NUP82Family