9A4V | pdb_00009a4v

Integrative model of PT1-ODO2 by crosslinking MS and deep learning

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	PT1_BACSU	kinase activity transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups phosphoenolpyruvate-protein phosphotransferase activity phosphotransferase activity, nitrogenous group as acceptor cation binding ion binding binding metal ion binding small molecule binding	import into cell phosphoenolpyruvate-dependent sugar phosphotransferase system transport import across plasma membrane carbohydrate import across plasma membrane carbohydrate transport establishment of localization transmembrane transport localization cellular process carbohydrate transmembrane transport carbohydrate derivative transport N-acetylglucosamine transport	membrane microdomain membrane raft cellular anatomical structure membrane intracellular anatomical structure cytoplasm
B	ODO2_BACSU	S-succinyltransferase activity catalytic activity, acting on a protein acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity S-acyltransferase activity dihydrolipoyllysine-residue succinyltransferase activity catalytic activity succinyltransferase activity	aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds primary metabolic process metabolic process cellular process generation of precursor metabolites and energy lysine metabolic process catabolic process oxoacid metabolic process L-lysine catabolic process aspartate family amino acid metabolic process amino acid metabolic process aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds primary metabolic process metabolic process cellular process generation of precursor metabolites and energy lysine metabolic process catabolic process oxoacid metabolic process L-lysine catabolic process aspartate family amino acid metabolic process amino acid metabolic process acetyl-CoA metabolic process organic acid catabolic process organic acid metabolic process alpha-amino acid metabolic process nucleobase-containing compound metabolic process acyl-CoA metabolic process nucleobase-containing small molecule metabolic process carboxylic acid catabolic process amide catabolic process phosphate-containing compound metabolic process sulfur compound metabolic process small molecule metabolic process amide metabolic process thioester metabolic process phosphorus metabolic process amino acid catabolic process nucleoside phosphate metabolic process aspartate family amino acid catabolic process L-lysine catabolic process to acetyl-CoA via saccharopine lysine catabolic process L-amino acid catabolic process carboxylic acid metabolic process L-amino acid metabolic process purine-containing compound metabolic process proteinogenic amino acid metabolic process alpha-amino acid catabolic process proteinogenic amino acid catabolic process L-lysine catabolic process to acetyl-CoA organophosphate metabolic process small molecule catabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex oxoglutarate dehydrogenase complex catalytic complex oxidoreductase complex transferase complex tricarboxylic acid cycle heteromeric enzyme complex alpha-ketoacid dehydrogenase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily	Homologous Superfamily
A	IPR008279	PEP-utilising enzyme, mobile domain	Domain
A	IPR018274	PEP-utilising enzyme, active site	Active Site
A	IPR036618	PtsI, HPr-binding domain superfamily	Homologous Superfamily
A	IPR006318	Phosphotransferase system, enzyme I-like	Domain
A	IPR023151	PEP-utilising enzyme, conserved site	Conserved Site
A	IPR036637	Phosphohistidine domain superfamily	Homologous Superfamily
A	IPR050499	Phosphoenolpyruvate-dependent sugar PTS enzyme	Family
A	IPR040442	Pyruvate kinase-like domain superfamily	Homologous Superfamily
A	IPR008731	Phosphotransferase system, enzyme I N-terminal	Domain
A	IPR024692	Phosphotransferase system, enzyme I	Family
A	IPR000121	PEP-utilising enzyme, C-terminal	Domain
B	IPR001078	2-oxoacid dehydrogenase acyltransferase, catalytic domain	Domain
B	IPR006255	Dihydrolipoamide succinyltransferase	Family
B	IPR050537	2-oxoacid dehydrogenase	Family
B	IPR023213	Chloramphenicol acetyltransferase-like domain superfamily	Homologous Superfamily
B	IPR036625	E3-binding domain superfamily	Homologous Superfamily
B	IPR004167	Peripheral subunit-binding domain	Domain
B	IPR011053	Single hybrid motif	Homologous Superfamily
B	IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	Binding Site
B	IPR000089	Biotin/lipoyl attachment	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 9A4V | pdb_00009a4v

Integrative model of PT1-ODO2 by crosslinking MS and deep learning

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

9A4V | pdb_00009a4v