9HJ3 | pdb_00009hj3

Bacteroides thetaiotaomicron BAM complex


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07244Surface antigen variable number repeat (POTRA)Surface antigen variable number repeatThis family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members ...This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure.
Domain
PF01103Omp85 superfamily domain (Omp85)Omp85 superfamily domainThe Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA fro ...The Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA from E. coli.
Domain
C [auth F]PF03349Outer membrane protein transport protein (OMPP1/FadL/TodX) (Toluene_X)Outer membrane protein transport protein (OMPP1/FadL/TodX)- Family
D [auth H]PF19755Domain of unknown function (DUF6242) (DUF6242)Domain of unknown function (DUF6242)This presumed domain is functionally uncharacterised. This domain family is found in bacteria, and is approximately 290 amino acids in length. It contains a BNR/Asp box motif at the C-terminal, which contains the characteristic sequence motif SxDxGxT ...This presumed domain is functionally uncharacterised. This domain family is found in bacteria, and is approximately 290 amino acids in length. It contains a BNR/Asp box motif at the C-terminal, which contains the characteristic sequence motif SxDxGxT/xW of the BNR family, present as repeats in sialidases and others glycosyl hydrolases [1].
Domain
E [auth I]PF00254FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)FKBP-type peptidyl-prolyl cis-trans isomeraseDomain
PF14092Domain of unknown function (DUF4270) (DUF4270)Domain of unknown function (DUF4270)- Family