9I16 | pdb_00009i16

Structure of RecQL-dsDNA-ADP-AlF4 complex from Bos taurus

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, E, F	ATP-dependent DNA helicase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding nucleic acid binding nucleic acid conformation isomerase activity four-way junction helicase activity isomerase activity DNA helicase activity catalytic activity, acting on a nucleic acid helicase activity ATP-dependent activity ATP-dependent activity, acting on DNA catalytic activity, acting on DNA catalytic activity macromolecular conformation isomerase activity hydrolase activity 3'-5' DNA helicase activity cation binding metal ion binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular response to stimulus double-strand break repair response to stimulus DNA recombination cellular response to stress DNA damage response nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process cellular response to stimulus double-strand break repair response to stimulus DNA recombination cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm membrane-bounded organelle nucleus intracellular membrane-bounded organelle
D	ATP-dependent DNA helicase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid conformation isomerase activity isomerase activity single-stranded DNA binding catalytic activity, acting on a nucleic acid nucleic acid binding DNA/DNA annealing activity catalytic activity, acting on DNA annealing activity catalytic activity macromolecular conformation isomerase activity hydrolase activity DNA helicase activity helicase activity 3'-5' DNA helicase activity ATP-dependent activity ATP-dependent activity, acting on DNA double-stranded DNA helicase activity	DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process DNA replication metabolic process cellular process macromolecule metabolic process replication fork processing DNA recombination	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen
G, I, K	DNA (5'-D(PGPGPAPTPCPTPCPGPAPCPGPCPTPCPTPCPCPC)-3')	-	-	-
H, J, L	DNA (5'-D(PAPGPAPGPCPGPTPCPGPAPGPAPTPCPCPC)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, E, F	IPR001650	Helicase, C-terminal domain-like	Domain
A, B, C, E, F	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A, B, C, E, F	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
A, B, C, E, F	IPR032284	ATP-dependent DNA helicase RecQ, zinc-binding domain	Domain
A, B, C, E, F	IPR011545	DEAD/DEAH-box helicase domain	Domain
A, B, C, E, F	IPR004589	DNA helicase, ATP-dependent, RecQ type	Family
A, B, C, E, F	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
D	IPR001650	Helicase, C-terminal domain-like	Domain
D	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
D	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
D	IPR032284	ATP-dependent DNA helicase RecQ, zinc-binding domain	Domain
D	IPR011545	DEAD/DEAH-box helicase domain	Domain
D	IPR004589	DNA helicase, ATP-dependent, RecQ type	Family
D	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.