| D [auth LA] | IPR023672 | Large ribosomal subunit protein uL2, archaea/eukaryota | Family |
| D [auth LA] | IPR022669 | Large ribosomal subunit protein uL2, C-terminal | Domain |
| D [auth LA] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| D [auth LA] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| D [auth LA] | IPR022671 | Large ribosomal subunit protein uL2, conserved site | Conserved Site |
| D [auth LA] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
| D [auth LA] | IPR022666 | Large ribosomal subunit protein uL2, RNA-binding domain | Domain |
| D [auth LA] | IPR014726 | Large ribosomal subunit protein uL2, domain 3 | Homologous Superfamily |
| D [auth LA] | IPR002171 | Large ribosomal subunit protein uL2 | Family |
| E [auth LB] | IPR019926 | Large ribosomal subunit protein uL3, conserved site | Conserved Site |
| E [auth LB] | IPR044892 | Ribosomal protein L3, domain 3, archaeal-type superfamily | Homologous Superfamily |
| E [auth LB] | IPR000597 | Large ribosomal subunit protein uL3 | Family |
| E [auth LB] | IPR045077 | Large ribosomal subunit protein uL3, archaea/eukaryota | Family |
| E [auth LB] | IPR009000 | Translation protein, beta-barrel domain superfamily | Homologous Superfamily |
| F [auth LC] | IPR025755 | Large ribosomal subunit protein uL4, C-terminal domain | Domain |
| F [auth LC] | IPR002136 | Large ribosomal subunit protein uL4 | Family |
| F [auth LC] | IPR013000 | Large ribosomal subunit protein uL4, eukaryota/archaea, conserved site | Conserved Site |
| F [auth LC] | IPR045240 | Large ribosomal subunit protein uL4, eukaryota/archaea | Family |
| F [auth LC] | IPR023574 | Large ribosomal subunit protein uL4 domain superfamily | Homologous Superfamily |
| J [auth LG] | IPR050257 | Large ribosomal subunit protein eL8/uL1-like | Family |
| J [auth LG] | IPR004038 | Ribosomal protein eL8/eL30/eS12/Gadd45 | Domain |
| J [auth LG] | IPR004037 | Large ribosomal subunit protein eL8-like, conserved site | Conserved Site |
| J [auth LG] | IPR029064 | Ribosomal protein eL30-like superfamily | Homologous Superfamily |
| J [auth LG] | IPR018492 | Ribosomal protein eL8/Nhp2 family | Family |
| J [auth LG] | IPR001921 | Large ribosomal subunit protein eL8, eukaryota | Family |
| M [auth LJ] | IPR020929 | Large ribosomal subunit protein uL5, conserved site | Conserved Site |
| M [auth LJ] | IPR031309 | Large ribosomal subunit protein uL5, C-terminal | Domain |
| M [auth LJ] | IPR022803 | Large ribosomal subunit protein uL5 domain superfamily | Homologous Superfamily |
| M [auth LJ] | IPR031310 | Large ribosomal subunit protein uL5, N-terminal | Domain |
| M [auth LJ] | IPR002132 | Large ribosomal subunit protein uL5 | Family |
| O [auth LM] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| O [auth LM] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| O [auth LM] | IPR039660 | Large ribosomal subunit protein eL14 | Family |
| O [auth LM] | IPR002784 | Large ribosomal subunit protein eL14 domain | Domain |
| U [auth LS] | IPR028877 | Large ribosomal subunit protein eL20 | Family |
| U [auth LS] | IPR021138 | Large ribosomal subunit protein eL20, eukaryota | Family |
| U [auth LS] | IPR023573 | Large ribosomal subunit protein eL20 domain | Domain |
| V [auth LT] | IPR001147 | Large ribosomal subunit protein eL21 | Family |
| V [auth LT] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| V [auth LT] | IPR018259 | Large ribosomal subunit protein eL21, conserved site | Conserved Site |
| V [auth LT] | IPR036948 | Large ribosomal subunit protein eL21 superfamily | Homologous Superfamily |
| Y [auth LX] | IPR019985 | Large ribosomal subunit protein uL23 | Family |
| Y [auth LX] | IPR001014 | Large ribosomal subunit protein uL23, conserved site | Conserved Site |
| Y [auth LX] | IPR013025 | Large ribosomal subunit protein uL23-like | Family |
| Y [auth LX] | IPR012678 | Ribosomal protein uL23/eL15/eS24 core domain superfamily | Homologous Superfamily |
| Y [auth LX] | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily |
| Y [auth LX] | IPR005633 | Large ribosomal subunit protein uL23, N-terminal | Domain |
| AA [auth LZ] | IPR001141 | Large ribosomal subunit protein eL27 | Family |
| AA [auth LZ] | IPR018262 | Large ribosomal subunit protein eL27, conserved site | Conserved Site |
| AA [auth LZ] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| AA [auth LZ] | IPR038655 | Large ribosomal subunit protein eL27 superfamily | Homologous Superfamily |
| AA [auth LZ] | IPR005824 | KOW | Domain |
| AA [auth LZ] | IPR041991 | Large ribosomal subunit protein eL27, KOW domain | Domain |
| DA [auth Lc] | IPR022991 | Large ribosomal subunit protein eL30, conserved site | Conserved Site |
| DA [auth Lc] | IPR004038 | Ribosomal protein eL8/eL30/eS12/Gadd45 | Domain |
| DA [auth Lc] | IPR000231 | Large ribosomal subunit protein eL30 | Family |
| DA [auth Lc] | IPR039109 | Large ribosomal subunit protein eL30-like | Family |
| DA [auth Lc] | IPR029064 | Ribosomal protein eL30-like superfamily | Homologous Superfamily |
| FA [auth Le] | IPR036351 | Large ribosomal subunit protein eL32 superfamily | Homologous Superfamily |
| FA [auth Le] | IPR001515 | Large ribosomal subunit protein eL32 | Family |
| FA [auth Le] | IPR018263 | Large ribosomal subunit protein eL32, conserved site | Conserved Site |
| IA [auth Lh] | IPR036049 | Large ribosomal subunit protein uL29 superfamily | Homologous Superfamily |
| IA [auth Lh] | IPR045059 | Large ribosomal subunit protein uL29, eukaryota | Family |
| IA [auth Lh] | IPR001854 | Large ribosomal subunit protein uL29 | Family |
| IA [auth Lh] | IPR018254 | Large ribosomal subunit protein uL29, conserved site | Conserved Site |
| JA [auth Li] | IPR000509 | Large ribosomal subunit protein eL36 | Family |
| JA [auth Li] | IPR038097 | Large ribosomal subunit protein eL36 domain superfamily | Homologous Superfamily |
| LA [auth Lk] | IPR002675 | Large ribosomal subunit protein eL38 | Family |
| LA [auth Lk] | IPR038464 | Large ribosomal subunit protein eL38 superfamily | Homologous Superfamily |
| MA [auth Ll] | IPR000077 | Large ribosomal subunit protein eL39 | Family |
| MA [auth Ll] | IPR020083 | Large ribosomal subunit protein eL39, conserved site | Conserved Site |
| MA [auth Ll] | IPR023626 | Large ribosomal subunit protein eL39 domain superfamily | Homologous Superfamily |
| SA [auth P] | IPR002769 | Translation initiation factor IF6 | Family |
| I [auth LF] | IPR005998 | Large ribosomal subunit protein uL30, eukaryota | Family |
| I [auth LF] | IPR016082 | Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain | Domain |
| I [auth LF] | IPR018038 | Large ribosomal subunit protein uL30, conserved site | Conserved Site |
| I [auth LF] | IPR036919 | Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily | Homologous Superfamily |
| I [auth LF] | IPR035808 | Large ribosomal subunit protein uL30, eukaryota/archaea | Domain |
| I [auth LF] | IPR039699 | Large ribosomal subunit protein uL30 | Family |
| I [auth LF] | IPR012988 | Large ribosomal subunit protein uL30, N-terminal, eukaryota | Domain |
| H [auth LE] | IPR005568 | Large ribosomal subunit protein uL6, N-terminal | Domain |
| H [auth LE] | IPR049633 | Large ribosomal subunit protein eL6, conserved site | Conserved Site |
| H [auth LE] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| H [auth LE] | IPR041997 | Large ribosomal subunit protein eL6, KOW domain | Domain |
| H [auth LE] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| H [auth LE] | IPR000915 | Large ribosomal subunit protein eL6 | Family |
| G [auth LD] | IPR025607 | Large ribosomal subunit protein uL18, C-terminal, eukaryotes | Domain |
| G [auth LD] | IPR005485 | Large ribosomal subunit protein uL18, eukaryota/archaea | Family |
| RA [auth CA] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| RA [auth CA] | IPR047113 | Proliferation-associated protein 2G4/ARX1 | Family |
| RA [auth CA] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| RA [auth CA] | IPR018349 | Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site | Binding Site |
| RA [auth CA] | IPR036005 | Creatinase/aminopeptidase-like | Homologous Superfamily |
| RA [auth CA] | IPR004545 | PA2G4 family | Family |
| RA [auth CA] | IPR000994 | Peptidase M24 | Domain |
| QA [auth Lr] | IPR029004 | Ribosomal eL28/Mak16 | Domain |
| QA [auth Lr] | IPR002672 | Large ribosomal subunit protein eL28 | Family |
| PA [auth Lp] | IPR011331 | Large ribosomal subunit protein eL37/eL43 | Homologous Superfamily |
| PA [auth Lp] | IPR002674 | Large ribosomal subunit protein eL43 | Family |
| PA [auth Lp] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
| OA [auth Lo] | IPR000552 | Large ribosomal subunit protein eL42 | Family |
| OA [auth Lo] | IPR053708 | Eukaryotic Ribosomal Large Subunit eL42 | Homologous Superfamily |
| OA [auth Lo] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
| NA [auth Lm] | IPR019954 | Ubiquitin conserved site | Conserved Site |
| NA [auth Lm] | IPR038587 | Large ribosomal subunit protein eL40 superfamily | Homologous Superfamily |
| NA [auth Lm] | IPR050158 | Ubiquitin and ubiquitin-like | Family |
| NA [auth Lm] | IPR000626 | Ubiquitin-like domain | Domain |
| NA [auth Lm] | IPR019956 | Ubiquitin domain | Domain |
| NA [auth Lm] | IPR001975 | Large ribosomal subunit protein eL40 domain | Domain |
| NA [auth Lm] | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |
| KA [auth Lj] | IPR011331 | Large ribosomal subunit protein eL37/eL43 | Homologous Superfamily |
| KA [auth Lj] | IPR001569 | Large ribosomal subunit protein eL37 | Family |
| KA [auth Lj] | IPR018267 | Large ribosomal subunit protein eL37, conserved site | Conserved Site |
| KA [auth Lj] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
| HA [auth Lg] | IPR038562 | Large ribosomal subunit protein eL34, C-terminal domain superfamily | Homologous Superfamily |
| HA [auth Lg] | IPR018065 | Large ribosomal subunit protein eL34, conserved site | Conserved Site |
| HA [auth Lg] | IPR008195 | Large ribosomal subunit protein eL34 | Family |
| GA [auth Lf] | IPR038661 | Large ribosomal subunit protein eL33 superfamily | Homologous Superfamily |
| GA [auth Lf] | IPR018266 | Large ribosomal subunit protein eL33, conserved site | Conserved Site |
| GA [auth Lf] | IPR009000 | Translation protein, beta-barrel domain superfamily | Homologous Superfamily |
| GA [auth Lf] | IPR001780 | Large ribosomal subunit protein eL33 | Family |
| EA [auth Ld] | IPR000054 | Large ribosomal subunit protein eL31 | Family |
| EA [auth Ld] | IPR020052 | Large ribosomal subunit protein eL31, conserved site | Conserved Site |
| EA [auth Ld] | IPR023621 | Large ribosomal subunit protein eL31 domain superfamily | Homologous Superfamily |
| CA [auth Lb] | IPR002673 | Large ribosomal subunit protein eL29 | Family |
| BA [auth La] | IPR027386 | Ribosomal uL15, N-terminal | Homologous Superfamily |
| BA [auth La] | IPR001196 | Large ribosomal subunit protein uL15, conserved site | Conserved Site |
| BA [auth La] | IPR021131 | Large ribosomal subunit protein uL15/eL18 | Domain |
| BA [auth La] | IPR030878 | Large ribosomal subunit protein uL15 | Family |
| BA [auth La] | IPR036227 | Large ribosomal subunit protein uL15/eL18 superfamily | Homologous Superfamily |
| Z [auth LY] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| Z [auth LY] | IPR005756 | Large ribosomal subunit protein uL24, eukaryota_archaea | Family |
| Z [auth LY] | IPR041988 | Large ribosomal subunit protein uL24, KOW domain | Domain |
| Z [auth LY] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| Z [auth LY] | IPR005824 | KOW | Domain |
| Z [auth LY] | IPR005825 | Large ribosomal subunit protein uL24, conserved site | Conserved Site |
| X [auth LV] | IPR019972 | Large ribosomal subunit protein uL14, conserved site | Conserved Site |
| X [auth LV] | IPR036853 | Large ribosomal subunit protein uL14 superfamily | Homologous Superfamily |
| X [auth LV] | IPR000218 | Large ribosomal subunit protein uL14 | Family |
| W [auth LU] | IPR002671 | Large ribosomal subunit protein eL22 | Family |
| W [auth LU] | IPR038526 | Large ribosomal subunit protein eL22 superfamily | Homologous Superfamily |
| T [auth LR] | IPR039547 | Large ribosomal subunit protein eL19 | Family |
| T [auth LR] | IPR023638 | Large ribosomal subunit protein eL19, conserved site | Conserved Site |
| T [auth LR] | IPR033935 | Large ribosomal subunit protein eL19, eukaryotic | Domain |
| T [auth LR] | IPR015972 | Large ribosomal subunit protein eL19, domain 1 | Homologous Superfamily |
| T [auth LR] | IPR035970 | Large ribosomal subunit protein eL19 superfamily | Homologous Superfamily |
| T [auth LR] | IPR000196 | Large ribosomal subunit protein eL19 domain | Domain |
| S [auth LQ] | IPR021132 | Large ribosomal subunit protein eL18, conserved site | Conserved Site |
| S [auth LQ] | IPR000039 | Large ribosomal subunit protein eL18 | Family |
| S [auth LQ] | IPR021131 | Large ribosomal subunit protein uL15/eL18 | Domain |
| S [auth LQ] | IPR036227 | Large ribosomal subunit protein uL15/eL18 superfamily | Homologous Superfamily |
| R [auth LP] | IPR005721 | Large ribosomal subunit protein uL22, eukaryota/archaea | Family |
| R [auth LP] | IPR036394 | Ribosomal protein uL22 superfamily | Homologous Superfamily |
| R [auth LP] | IPR001063 | Large ribosomal subunit protein uL22 | Family |
| R [auth LP] | IPR018260 | Large ribosomal subunit protein uL22, conserved site | Conserved Site |
| Q [auth LO] | IPR023563 | Large ribosomal subunit protein uL13, conserved site | Conserved Site |
| Q [auth LO] | IPR005755 | Large ribosomal subunit protein uL13, eukaryota/archaea | Family |
| Q [auth LO] | IPR005822 | Large ribosomal subunit protein uL13 | Family |
| Q [auth LO] | IPR036899 | Large ribosomal subunit protein uL13 superfamily | Homologous Superfamily |
| P [auth LN] | IPR020925 | Large ribosomal subunit protein eL15, conserved site | Conserved Site |
| P [auth LN] | IPR012678 | Ribosomal protein uL23/eL15/eS24 core domain superfamily | Homologous Superfamily |
| P [auth LN] | IPR024794 | Large ribosomal subunit protein eL15 core domain superfamily | Homologous Superfamily |
| P [auth LN] | IPR000439 | Large ribosomal subunit protein eL15 | Family |
| N [auth LL] | IPR001380 | Large ribosomal subunit protein eL13 | Family |
| N [auth LL] | IPR018256 | Large ribosomal subunit protein eL13, conserved site | Conserved Site |
| L [auth LI] | IPR036920 | Large ribosomal subunit protein uL16 superfamily | Homologous Superfamily |
| L [auth LI] | IPR018255 | Large ribosomal subunit protein uL16, conserved site, eukaryota/archaea | Conserved Site |
| L [auth LI] | IPR047873 | Large ribosomal subunit protein uL16 | Family |
| L [auth LI] | IPR001197 | Large ribosomal subunit protein uL16, eukaryota/archaea | Family |
| L [auth LI] | IPR016180 | Large ribosomal subunit protein uL16 domain | Domain |
| K [auth LH] | IPR036789 | Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily | Homologous Superfamily |
| K [auth LH] | IPR020040 | Large ribosomal subunit protein uL6, alpha-beta domain | Domain |
| K [auth LH] | IPR002359 | Large ribosomal subunit protein uL6, conserved site-2 | Conserved Site |
| K [auth LH] | IPR000702 | Large ribosomal subunit protein uL6-like | Family |