9R65 | pdb_00009r65

CPS secretion pathway Wza-Wzc_C8 (Conf 0)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
P	SCOP2B Superfamily	Simibi-like P-loop NTPases	8056299	3002018	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Simibi-like P-loop NTPases	8056299	3002018	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Simibi-like P-loop NTPases	8056299	3002018	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Simibi-like P-loop NTPases	8056299	3002018	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Simibi-like P-loop NTPases	8056299	3002018	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Simibi-like P-loop NTPases	8056299	3002018	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Simibi-like P-loop NTPases	8056299	3002018	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Simibi-like P-loop NTPases	8056299	3002018	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
I, J, K, L, M I, J, K, L, M, N, O, P	PF13614	AAA domain (AAA_31)	AAA domain	This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	Domain
I, J, K, L, M I, J, K, L, M, N, O, P	PF13807	G-rich domain on putative tyrosine kinase (GNVR)	G-rich domain on putative tyrosine kinase	-	Family
I, J, K, L, M I, J, K, L, M, N, O, P	PF23607	Tyrosine-protein kinase Wzc, N-terminal domain (WZC_N)	Tyrosine-protein kinase Wzc, N-terminal domain	This domain is found in the homologues of Tyrosine-protein kinases Wzc and Etk [1,2]. The later are expressed only in enteropathogenic strains. Wzc is required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form o ...	This domain is found in the homologues of Tyrosine-protein kinases Wzc and Etk [1,2]. The later are expressed only in enteropathogenic strains. Wzc is required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form of this enzyme is inactive. This domain folds into a beta-sandwich.	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	PF22461	SLBB domain (SLBB_2)	SLBB domain	This entry represents a set of SLBB domains [5].	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	PF18412	Outer-membrane lipoprotein Wza C-terminal domain (Wza_C)	Outer-membrane lipoprotein Wza C-terminal domain	This is the C-terminal domain found in Wza, an integral outer membrane lipoprotein, which is essential for group 1 capsule export in Escherichia coli. The domain is exposed on the cell surface and is suggested to mimic antimicrobial peptide pore form ...	This is the C-terminal domain found in Wza, an integral outer membrane lipoprotein, which is essential for group 1 capsule export in Escherichia coli. The domain is exposed on the cell surface and is suggested to mimic antimicrobial peptide pore formation [1].	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	PF02563	Polysaccharide biosynthesis/export protein (Poly_export)	Polysaccharide biosynthesis/export protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I, J, K, L, M I, J, K, L, M, N, O, P	Tyrosine-protein kinase wzc	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity identical protein binding protein binding protein tyrosine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups	carbohydrate metabolic process polysaccharide metabolic process biosynthetic process polysaccharide biosynthetic process carbohydrate biosynthetic process metabolic process cellular process primary metabolic process macromolecule metabolic process macromolecule biosynthetic process carbohydrate derivative biosynthetic process colanic acid metabolic process carbohydrate derivative metabolic process colanic acid biosynthetic process	cell periphery cellular anatomical structure plasma membrane membrane
A, B, C, D, E A, B, C, D, E, F, G, H	Putative polysaccharide export protein Wza	wide pore channel activity passive transmembrane transporter activity channel activity porin activity transporter activity transmembrane transporter activity macromolecule transmembrane transporter activity polysaccharide transmembrane transporter activity carbohydrate transmembrane transporter activity	colanic acid metabolic process carbohydrate derivative metabolic process metabolic process cellular process macromolecule metabolic process localization polysaccharide localization transport macromolecule localization carbohydrate transport polysaccharide transport establishment of localization carbohydrate metabolic process polysaccharide metabolic process colanic acid metabolic process carbohydrate derivative metabolic process metabolic process cellular process macromolecule metabolic process localization polysaccharide localization transport macromolecule localization carbohydrate transport polysaccharide transport establishment of localization carbohydrate metabolic process polysaccharide metabolic process biosynthetic process polysaccharide biosynthetic process carbohydrate biosynthetic process primary metabolic process macromolecule biosynthetic process monoatomic ion transport	protein-containing complex cellular anatomical structure membrane pore complex membrane protein complex cell periphery cell outer membrane external encapsulating structure cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I, J, K, L, M I, J, K, L, M, N, O, P	IPR050445	Bacterial polysaccharide biosynthesis and export	Family
I, J, K, L, M I, J, K, L, M, N, O, P	IPR025669	AAA domain	Domain
I, J, K, L, M I, J, K, L, M, N, O, P	IPR005702	Tyrosine-protein kinase Wzc-like, C-terminal domain	Domain
I, J, K, L, M I, J, K, L, M, N, O, P	IPR003856	Polysaccharide chain length determinant, N-terminal domain	Domain
I, J, K, L, M I, J, K, L, M, N, O, P	IPR032807	Tyrosine-protein kinase, G-rich domain	Domain
I, J, K, L, M I, J, K, L, M, N, O, P	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR049712	Polysaccharide export protein	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR040716	Outer-membrane lipoprotein Wza, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003715	Polysaccharide export protein, N-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR054765	SLBB domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.